RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	C5orf64	Q2M2E5	130 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	JAGN1	Q8N5M9	183 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	CASTOR1	Q8WTX7	329 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	HARBI1	Q96MB7	349 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	VPS25	Q9BRG1	176 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	STEAP1	Q9UHE8	339 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	PILRB	Q9UKJ0	227 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	PHF3	Q92576	2039 aa	Known RBP	10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	TMEM235	A6NFC5	223 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	FAM74A7	A6NL05	159 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ST8SIA3	O43173	380 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	CDC40	O60508	579 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	TXNDC12	O95881	172 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	AMY2A	P04746	511 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	CD14	P08571	375 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	FGL1	Q08830	312 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	FAM74A3	Q4VXF1	159 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GLYATL3	Q5SZD4	288 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	FAM69B	Q5VUD6	431 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	TMEM88	Q6PEY1	159 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SLC36A1	Q7Z2H8	476 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	C17orf82	Q86X59	251 aa	Predicted RBP	10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	OR1J2	Q8NGS2	313 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	OR1S1	Q8NH92	325 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GPR119	Q8TDV5	335 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	TECTB	Q96PL2	329 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	OR6C1	Q96RD1	312 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	CMKLR1	Q99788	373 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	OR11A1	Q9GZK7	315 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	PRR13	Q9NZ81	148 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063		H0YIG0	161 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SIVA1	O15304	175 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SLC16A7	O60669	478 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	UTS2	O95399	124 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	DLX5	P56178	289 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	RPS4X	P62701	263 aa	Known RBP	10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	CCL7	P80098	99 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	FUT7	Q11130	342 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SKP2	Q13309	424 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GGTLC2	Q14390	218 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GK2	Q14410	553 aa	Predicted RBP	10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	NR0B2	Q15466	257 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	NCMAP	Q5T1S8	102 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ZNF684	Q5T5D7	378 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	OR52W1	Q6IF63	320 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	UNQ6494/PRO21346	Q6UXR6	183 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	UNQ6126/PRO20091	Q6UXV3	157 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	BAIAP2L2	Q6UXY1	529 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SLC16A9	Q7RTY1	509 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ATG4D	Q86TL0	474 aa	Predicted RBP	10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GVQW1	Q8N7I0	195 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	FAM3D	Q96BQ1	224 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SPACA5	Q96QH8	159 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GGACT	Q9BVM4	153 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SUCNR1	Q9BXA5	334 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	COMMD4	Q9H0A8	199 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	PLEKHA1	Q9HB21	404 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	LANCL2	Q9NS86	450 aa		10.28	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063		H7C417	338 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	PHYH	O14832	338 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	PPBP	P02775	128 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	TACSTD2	P09758	323 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	PRSS3	P35030	304 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GABRA4	P48169	554 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ZNF117	Q03924	483 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	PLCXD3	Q63HM9	321 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ASPHD2	Q6ICH7	369 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	P4HA3	Q7Z4N8	544 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ZNF546	Q86UE3	836 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	WDFY1	Q8IWB7	410 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	TMEM105	Q8N8V8	129 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	LRRC75A	Q8NAA5	344 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	CCDC107	Q8WV48	283 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	PNPLA2	Q96AD5	504 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	YAE1D1	Q9NRH1	226 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	TAS2R4	Q9NYW5	299 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	MTFP1	Q9UDX5	166 aa		10.27	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SDK2	Q58EX2	2172 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063		F8WDY8	70 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OR2A4	O95047	310 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ABHD16A	O95870	558 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	F12	P00748	615 aa	Predicted RBP	10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	RAB40AL	P0C0E4	278 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ZP3	P21754	424 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MNDA	P41218	407 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CRYBA4	P53673	196 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SLC37A1	P57057	533 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ZNF528	Q3MIS6	628 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ELFN2	Q5R3F8	820 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	STEAP1B	Q6NZ63	245 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SLC16A14	Q7RTX9	510 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MYPOP	Q86VE0	399 aa	Predicted RBP	10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SPIC	Q8N5J4	248 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TMEM104	Q8NE00	496 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OR10K1	Q8NGX5	313 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	RAB40A	Q8WXH6	277 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	EXTL1	Q92935	676 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OR2A7	Q96R45	310 aa		10.27	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	UTP23	Q9BRU9	249 aa	Known RBP	10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms