RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 RAB1CQ92928 201 aa7.9□□□□□ -1.14
UBBP4-201ENST00000583708 MUL1Q969V5 352 aa7.9□□□□□ -1.14
UBBP4-201ENST00000583708 TMEM106AQ96A25 262 aa7.9□□□□□ -1.14
UBBP4-201ENST00000583708 FOXRED1Q96CU9 486 aaPredicted RBP7.9□□□□□ -1.14
UBBP4-201ENST00000583708 OPALINQ96PE5 141 aa7.9□□□□□ -1.14
UBBP4-201ENST00000583708 SORCS2Q96PQ0 1159 aa7.9□□□□□ -1.14
UBBP4-201ENST00000583708 OR2V2Q96R30 315 aa7.9□□□□□ -1.14
UBBP4-201ENST00000583708 MRPS26Q9BYN8 205 aaKnown RBP7.9□□□□□ -1.14
UBBP4-201ENST00000583708 PKIBQ9C010 78 aa7.9□□□□□ -1.14
UBBP4-201ENST00000583708 SLITRK2Q9H156 845 aa7.9□□□□□ -1.14
UBBP4-201ENST00000583708 LIME1Q9H400 295 aa7.9□□□□□ -1.14
UBBP4-201ENST00000583708 TMEM138Q9NPI0 162 aa7.9□□□□□ -1.14
UBBP4-201ENST00000583708 NDUFB11Q9NX14 153 aa7.9□□□□□ -1.14
UBBP4-201ENST00000583708 RASL12Q9NYN1 266 aa7.9□□□□□ -1.14
UBBP4-201ENST00000583708 GSTK1Q9Y2Q3 226 aa7.9□□□□□ -1.14
UBBP4-201ENST00000583708 POLDIP2Q9Y2S7 368 aa7.9□□□□□ -1.14
UBBP4-201ENST00000583708 POLQO75417 2590 aa7.9□□□□□ -1.15
UBBP4-201ENST00000583708 USF3Q68DE3 2245 aa7.9□□□□□ -1.15
UBBP4-201ENST00000583708 SULT1B1O43704 296 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 NOS1APO75052 506 aaPredicted RBP7.89□□□□□ -1.15
UBBP4-201ENST00000583708 TMEM127O75204 238 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 RGS9O75916 674 aaPredicted RBP7.89□□□□□ -1.15
UBBP4-201ENST00000583708 CYB5AP00167 134 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 IGHV4-39P01824 125 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 UCHL1P09936 223 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 PSMB9P28065 219 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 FGF9P31371 208 aaPredicted RBP7.89□□□□□ -1.15
UBBP4-201ENST00000583708 TGFBR2P37173 567 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 CDKN1AP38936 164 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 MAGEB1P43366 347 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 BMXP51813 675 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 CAPZA1P52907 286 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 CCL8P80075 99 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 MAB21L1Q13394 359 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 TSTQ16762 297 aaKnown RBP7.89□□□□□ -1.15
UBBP4-201ENST00000583708 ODF4Q2M2E3 257 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 C11orf91Q3C1V1 193 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 PLCXD3Q63HM9 321 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 DNM1P46Q6ZS02 220 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 FAM90A1Q86YD7 464 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 MKXQ8IYA7 352 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 Q8IYB0 196 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 SAXO1Q8IYX7 474 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 NKAIN3Q8N8D7 197 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 OR1M1Q8NGA1 313 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 ADAT3Q96EY9 351 aaPredicted RBP7.89□□□□□ -1.15
UBBP4-201ENST00000583708 BORCS8Q96FH0 119 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 POM121Q96HA1 1249 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 DERL3Q96Q80 235 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 OR51I2Q9H344 312 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 SEBOXQ9HB31 216 aaPredicted RBP7.89□□□□□ -1.15
UBBP4-201ENST00000583708 GCM1Q9NP62 436 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 RNF7Q9UBF6 113 aa7.89□□□□□ -1.15
UBBP4-201ENST00000583708 SF3B6Q9Y3B4 125 aaKnown RBP7.89□□□□□ -1.15
UBBP4-201ENST00000583708 NBPF19A0A087WUL8 3843 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 TRAV1-2A0A0B4J238 106 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 PQLC2LA1A4F0 135 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 ZNF732B4DXR9 585 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 CLDN25C9JDP6 229 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 F5H5P2 479 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 H3BUI4 141 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 LILRA1O75019 489 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 HPXP02790 462 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 CD37P11049 281 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 IGFBP3P17936 291 aaPredicted RBP7.88□□□□□ -1.15
UBBP4-201ENST00000583708 ANOS1P23352 680 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 MPZP25189 248 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 IL24Q13007 206 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 RIN1Q13671 783 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 UBE2V2Q15819 145 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 HSD17B12Q53GQ0 312 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 CEACAM19Q7Z692 300 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 MUC20Q8N307 709 aaPredicted RBP7.88□□□□□ -1.15
UBBP4-201ENST00000583708 OR51A4Q8NGJ6 313 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 OR10AC1Q8NH08 325 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 ITLN1Q8WWA0 313 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 RGP1Q92546 391 aaPredicted RBP7.88□□□□□ -1.15
UBBP4-201ENST00000583708 FAM168AQ92567 244 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 NRGNQ92686 78 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 C12orf43Q96C57 262 aaKnown RBP7.88□□□□□ -1.15
UBBP4-201ENST00000583708 UQCC2Q9BRT2 126 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 SOX7Q9BT81 388 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 DNTTIP1Q9H147 329 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 TPK1Q9H3S4 243 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 TCF7L1Q9HCS4 588 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 SNTG1Q9NSN8 517 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 TMEM106BQ9NUM4 274 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 GHRLQ9UBU3 117 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 SCOCQ9UIL1 159 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 STUB1Q9UNE7 303 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 SSR3Q9UNL2 185 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 NPTNQ9Y639 398 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 SETXQ7Z333 2677 aaKnown RBP7.88□□□□□ -1.15
UBBP4-201ENST00000583708 CCDC168Q8NDH2 2452 aa7.88□□□□□ -1.15
UBBP4-201ENST00000583708 PDZD2O15018 2839 aa7.87□□□□□ -1.15
UBBP4-201ENST00000583708 LOC100289279A0A1B0GTE1 492 aa7.87□□□□□ -1.15
UBBP4-201ENST00000583708 H0YL77 283 aa7.87□□□□□ -1.15
UBBP4-201ENST00000583708 TMEM178BH3BS89 294 aa7.87□□□□□ -1.15
UBBP4-201ENST00000583708 J3QT63 122 aa7.87□□□□□ -1.15
UBBP4-201ENST00000583708 PDCD5O14737 125 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms