RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 UPK1BO75841 260 aa2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 LCA5LO95447 670 aa2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 TGFBR1P36897 503 aa2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 CFHR2P36980 270 aa2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 WDR43Q15061 677 aaKnown RBP eCLIP2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 SLC25A29Q8N8R3 303 aa2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 FAM184AQ8NB25 1140 aa2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 OR1S1Q8NH92 325 aa2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 KLF14Q8TD94 323 aaPredicted RBP2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 ING5Q8WYH8 240 aa2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 NAPGQ99747 312 aaPredicted RBP2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 IL22Q9GZX6 179 aa2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 ARV1Q9H2C2 271 aa2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 LOXHD1Q8IVV2 1947 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 LOC102724200A0A096LPH7 203 aaPredicted RBP2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 CENPXA8MT69 81 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 PRAMEF26H0Y7S4 382 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 SMC2O95347 1197 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 TTC4O95801 387 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 GCGP01275 180 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 KLK1P06870 262 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 SRMP19623 302 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 IL15RAQ13261 267 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 CALHM3Q86XJ0 350 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 DAW1Q8N136 415 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 ORMDL3Q8N138 153 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 TMEM104Q8NE00 496 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 OR8D1Q8WZ84 308 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 SNF8Q96H20 258 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 ARMC7Q9H6L4 198 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 PPIL1Q9Y3C6 166 aa2.86□□□□□ -1.95
SMARCE1-219ENST00000583294 THADAQ6YHU6 1953 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 DFFAO00273 331 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 OR7C2O60412 319 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 MSR1P21757 451 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 IL3RAP26951 378 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 MPV17P39210 176 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 IDH2P48735 452 aaKnown RBP2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 MTPNP58546 118 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 TAS2R39P59534 338 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 SLC35A1P78382 337 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 BTN1A1Q13410 526 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 MAD2L1BPQ15013 274 aaPredicted RBP2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 HHATQ5VTY9 493 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 C16orf47Q6ZP98 133 aaPredicted RBP2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 OR2W3Q7Z3T1 314 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 SGPP2Q8IWX5 399 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 BBS7Q8IWZ6 715 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 LINC00304Q8N9R0 145 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 FBXO36Q8NEA4 188 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 SFXN5Q8TD22 340 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 TFGQ92734 400 aaPredicted RBP2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 CA10Q9NS85 328 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 VAX2Q9UIW0 290 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 RWDD2AQ9UIY3 292 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 KPTNQ9Y664 436 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 NEURL4Q96JN8 1562 aa2.85□□□□□ -1.95
SMARCE1-219ENST00000583294 A8MWL6 223 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 IGKV1-39P01597 117 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 MAS1P04201 325 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 IGKV1D-39P04432 117 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 MMP7P09237 267 aaPredicted RBP2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 SLC35G6P0C7Q6 338 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 NELFEP18615 380 aaKnown RBP2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 TBPL2Q6SJ96 375 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 LINC00523Q86TU6 105 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 SLC7A5P1Q8MH63 180 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 CYB561A3Q8NBI2 242 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 TMEM234Q8WY98 164 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 C1orf50Q9BV19 199 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 LHX5Q9H2C1 402 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 OR51B5Q9H339 312 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 RAB22AQ9UL26 194 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 ENPP4Q9Y6X5 453 aa2.84□□□□□ -1.95
SMARCE1-219ENST00000583294 IGHV6-1A0A0B4J1U7 121 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 TRAV8-4A0A0B4J246 113 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 TRAV8-6A0A0B4J262 113 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 IGKV1-6A0A0C4DH72 117 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 P01737 135 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 GALR1P47211 349 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 RPS11P62280 158 aaKnown RBP eCLIP2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 FAM53BQ14153 422 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 SP6Q3SY56 376 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 THOC7Q6I9Y2 204 aaKnown RBP2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 TMEM136Q6ZRR5 245 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 VTCN1Q7Z7D3 282 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 PDPNQ86YL7 162 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 ZCCHC24Q8N2G6 241 aaKnown RBP2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 ZNF321PQ8N8H1 164 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 ZNF680Q8NEM1 530 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 OR10Z1Q8NGY1 313 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 SHANK2-AS3Q9BTD1 123 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 FBXO44Q9H4M3 255 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 KLF12Q9Y4X4 402 aa2.83□□□□□ -1.96
SMARCE1-219ENST00000583294 KIAA1671Q9BY89 1806 aa2.82□□□□□ -1.96
SMARCE1-219ENST00000583294 A0A1W2PRF3 423 aa2.82□□□□□ -1.96
SMARCE1-219ENST00000583294 A0A1W2PRM7 423 aa2.82□□□□□ -1.96
SMARCE1-219ENST00000583294 MBP02144 154 aa2.82□□□□□ -1.96
SMARCE1-219ENST00000583294 IGKV4-1P06312 121 aa2.82□□□□□ -1.96
SMARCE1-219ENST00000583294 PRSS3P35030 304 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms