RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 PPOXP50336 477 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 GPM6AP51674 278 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 FUT6P51993 359 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 TMBIM6P55061 237 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 VBP1P61758 197 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 PPP3R1P63098 170 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 MAB21L1Q13394 359 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 CRIP3Q6Q6R5 217 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 WDR86Q86TI4 376 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 OR52N4Q8NGI2 321 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 OR5A2Q8NGI9 324 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 OR8S1Q8NH09 359 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 TRMT10AQ8TBZ6 339 aaKnown RBP8.09□□□□□ -1.11
RFFL-210ENST00000582308 ISOC1Q96CN7 298 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 RNF170Q96K19 258 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 SPACA5Q96QH8 159 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 HIST1H2AAQ96QV6 131 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 GFI1Q99684 422 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 NKX3-1Q99801 234 aaPredicted RBP8.09□□□□□ -1.11
RFFL-210ENST00000582308 MICU1Q9BPX6 476 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 CACNG6Q9BXT2 260 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 CXXC4Q9H2H0 198 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 TPK1Q9H3S4 243 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 MS4A5Q9H3V2 200 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 TCF7L1Q9HCS4 588 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 ABCB9Q9NP78 766 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 TMEM138Q9NPI0 162 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 SNTG1Q9NSN8 517 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 CKLFQ9UBR5 152 aa8.09□□□□□ -1.11
RFFL-210ENST00000582308 NOP16Q9Y3C1 178 aaKnown RBP8.09□□□□□ -1.11
RFFL-210ENST00000582308 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.08□□□□□ -1.12
RFFL-210ENST00000582308 FAM230AA0A1W2PPH8 454 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 MEGF11A6BM72 1044 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 A6NHS1 94 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 OR5B21A6NL26 309 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 NCR1O76036 304 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 PTBP3O95758 552 aaKnown RBP8.08□□□□□ -1.12
RFFL-210ENST00000582308 MAS1P04201 325 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 ALDOBP05062 364 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 CD55P08174 381 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 CLEC2LP0C7M8 214 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 CD37P11049 281 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 PRKACBP22694 351 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 MYL9P24844 172 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 SDC2P34741 201 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 CD200P41217 278 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 MTNR1BP49286 362 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 OR10A3P58181 314 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 GNG3P63215 75 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 CCL8P80075 99 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 TNFAIP6P98066 277 aaPredicted RBP8.08□□□□□ -1.12
RFFL-210ENST00000582308 HNRNPA0Q13151 305 aaKnown RBP8.08□□□□□ -1.12
RFFL-210ENST00000582308 CNN3Q15417 329 aaKnown RBP8.08□□□□□ -1.12
RFFL-210ENST00000582308 FAM76BQ5HYJ3 339 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 FOXB2Q5VYV0 432 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 NR2C2APQ86WQ0 139 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 LYPD6Q86Y78 171 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 SPERTQ8NA61 448 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 DNAAF1Q8NEP3 725 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 ZNF420Q8TAQ5 688 aaPredicted RBP8.08□□□□□ -1.12
RFFL-210ENST00000582308 RAB2BQ8WUD1 216 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 ITLN1Q8WWA0 313 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 RFT1Q96AA3 541 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 SPSB1Q96BD6 273 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 MEGF10Q96KG7 1140 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 TECTBQ96PL2 329 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 OR2V2Q96R30 315 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 DIRC2Q96SL1 478 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 VRK1Q99986 396 aaPredicted RBP8.08□□□□□ -1.12
RFFL-210ENST00000582308 RTL8AQ9BWD3 113 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 OR51I2Q9H344 312 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 NKIRAS2Q9NYR9 191 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 FBXO9Q9UK97 447 aaPredicted RBP8.08□□□□□ -1.12
RFFL-210ENST00000582308 SLC7A11Q9UPY5 501 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 AK6Q9Y3D8 172 aaKnown RBP8.08□□□□□ -1.12
RFFL-210ENST00000582308 PMF1-BGLAPU3KQ54 211 aa8.08□□□□□ -1.12
RFFL-210ENST00000582308 A0A0G2JK05 382 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 SMIM31A0A1B0GVY4 71 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 SMIM30A4D0T7 59 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 TMEM210A6NLX4 147 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 H3BMQ9 156 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 H7C417 338 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 CDRT1O95170 752 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 GRPP07492 148 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 HCKP08631 526 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 OCMP0CE72 109 aaPredicted RBP8.07□□□□□ -1.12
RFFL-210ENST00000582308 BMP4P12644 408 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 TNFSF4P23510 183 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 RBMXP38159 391 aaKnown RBP8.07□□□□□ -1.12
RFFL-210ENST00000582308 CDKN1AP38936 164 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 RPS19P39019 145 aaKnown RBP8.07□□□□□ -1.12
RFFL-210ENST00000582308 PMELP40967 661 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 SRP9P49458 86 aaKnown RBP8.07□□□□□ -1.12
RFFL-210ENST00000582308 RBP2P50120 134 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 MTCP1P56278 107 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 CAV3P56539 151 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 MXD1Q05195 221 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 ZNF154Q13106 437 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 SPCS2Q15005 226 aa8.07□□□□□ -1.12
RFFL-210ENST00000582308 KISS1Q15726 138 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms