RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 NICN1Q9BSH3 213 aa19.7■□□□□ 0.74
CCDC47-204ENST00000582252 ZNF436Q9C0F3 470 aaPredicted RBP19.7■□□□□ 0.74
CCDC47-204ENST00000582252 ALX4Q9H161 411 aaPredicted RBP19.7■□□□□ 0.74
CCDC47-204ENST00000582252 GPR173Q9NS66 373 aa19.7■□□□□ 0.74
CCDC47-204ENST00000582252 SLC2A8Q9NY64 477 aa19.7■□□□□ 0.74
CCDC47-204ENST00000582252 SPRR3Q9UBC9 169 aa19.7■□□□□ 0.74
CCDC47-204ENST00000582252 ELF5Q9UKW6 265 aaPredicted RBP19.7■□□□□ 0.74
CCDC47-204ENST00000582252 NPTNQ9Y639 398 aa19.7■□□□□ 0.74
CCDC47-204ENST00000582252 FCER2P06734 321 aa19.69■□□□□ 0.74
CCDC47-204ENST00000582252 CXCL3P19876 107 aa19.69■□□□□ 0.74
CCDC47-204ENST00000582252 ACKR3P25106 362 aa19.69■□□□□ 0.74
CCDC47-204ENST00000582252 MPZP25189 248 aa19.69■□□□□ 0.74
CCDC47-204ENST00000582252 RTL6Q6ICC9 239 aa19.69■□□□□ 0.74
CCDC47-204ENST00000582252 UNQ6494/PRO21346Q6UXR6 183 aa19.69■□□□□ 0.74
CCDC47-204ENST00000582252 IDO2Q6ZQW0 420 aa19.69■□□□□ 0.74
CCDC47-204ENST00000582252 SLC36A1Q7Z2H8 476 aa19.69■□□□□ 0.74
CCDC47-204ENST00000582252 FAM89BQ8N5H3 189 aa19.69■□□□□ 0.74
CCDC47-204ENST00000582252 PRRC2CQ9Y520 2896 aaKnown RBP19.69■□□□□ 0.74
CCDC47-204ENST00000582252 A0A0A6YYD4 124 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 hCG_38984A0A1B0GV85 526 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 C1QTNF9BB2RNN3 333 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 M0QYG6 137 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 C1QTNF9P0C862 333 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 MGMTP16455 207 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 CPT2P23786 658 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 MTCP1P56278 107 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 ACTBL2Q562R1 376 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 OR5D18Q8NGL1 313 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 NUDCD2Q8WVJ2 157 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 SPSB4Q96A44 273 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 BORCS8Q96FH0 119 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 TM2D1Q9BX74 207 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 GON7Q9BXV9 100 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 TINAGL1Q9GZM7 467 aaPredicted RBP19.68■□□□□ 0.74
CCDC47-204ENST00000582252 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.68■□□□□ 0.74
CCDC47-204ENST00000582252 GLRX2Q9NS18 164 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 MGAT4CQ9UBM8 478 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 SLC7A11Q9UPY5 501 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 NRASP01111 189 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 FAM3AP98173 230 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 SF3B4Q15427 424 aaKnown RBP eCLIP19.68■□□□□ 0.748e-19■■■■■ 28.8
CCDC47-204ENST00000582252 OR8B8Q15620 311 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 RNFT1Q5M7Z0 435 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 TMEM42Q69YG0 159 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 PLXDC2Q6UX71 529 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 NUFIP2Q7Z417 695 aaKnown RBP19.68■□□□□ 0.74
CCDC47-204ENST00000582252 P4HA3Q7Z4N8 544 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 METTL9Q9H1A3 318 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 ELL3Q9HB65 397 aaPredicted RBP19.68■□□□□ 0.74
CCDC47-204ENST00000582252 MYOZ1Q9NP98 299 aaPredicted RBP19.68■□□□□ 0.74
CCDC47-204ENST00000582252 KCNN3Q9UGI6 736 aa19.68■□□□□ 0.74
CCDC47-204ENST00000582252 ZNF816-ZNF321PA0A0X1KG74 233 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 TMEM82A0PJX8 343 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 SMLR1H3BR10 107 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 SOCS1O15524 211 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 IGHG3P01860 377 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 ZNF735P0CB33 412 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 SERPINA2P20848 420 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 AGTR1P30556 359 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 RBP2P50120 134 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 PLP2Q04941 152 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 TBR1Q16650 682 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 C9orf135Q5VTT2 229 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 CRIP3Q6Q6R5 217 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 SEZ6L2Q6UXD5 910 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 CPEB3Q8NE35 698 aaKnown RBP19.67■□□□□ 0.74
CCDC47-204ENST00000582252 NANOS1Q8WY41 292 aaKnown RBP19.67■□□□□ 0.74
CCDC47-204ENST00000582252 DLL4Q9NR61 685 aa19.67■□□□□ 0.74
CCDC47-204ENST00000582252 A0A096LPE4 126 aa19.66■□□□□ 0.74
CCDC47-204ENST00000582252 A0A1W2PPZ6 126 aa19.66■□□□□ 0.74
CCDC47-204ENST00000582252 MFNGO00587 321 aa19.66■□□□□ 0.74
CCDC47-204ENST00000582252 ZNF780AO75290 641 aaPredicted RBP19.66■□□□□ 0.74
CCDC47-204ENST00000582252 ZNF92Q03936 586 aa19.66■□□□□ 0.74
CCDC47-204ENST00000582252 ZNF169Q14929 603 aaPredicted RBP19.66■□□□□ 0.74
CCDC47-204ENST00000582252 COLCA1Q6ZS62 124 aa19.66■□□□□ 0.74
CCDC47-204ENST00000582252 ZNF431Q8TF32 576 aaPredicted RBP19.66■□□□□ 0.74
CCDC47-204ENST00000582252 MS4A3Q96HJ5 214 aa19.66■□□□□ 0.74
CCDC47-204ENST00000582252 ANAPC10Q9UM13 185 aa19.66■□□□□ 0.74
CCDC47-204ENST00000582252 ARHGAP21Q5T5U3 1957 aa19.66■□□□□ 0.74
CCDC47-204ENST00000582252 A0A1W2PP11 408 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 IFNA6P05013 189 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 TMEM225BP0DP42 221 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 VSIG10L2P0DP72 767 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 CD79AP11912 226 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 MPGP29372 298 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 FUT6P51993 359 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 ATP1B3P54709 279 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 ZP1P60852 638 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 MALLQ13021 153 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 PPA1Q15181 289 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 SCGB2B2Q4G0G5 96 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 ZCCHC14Q8WYQ9 949 aaKnown RBP19.65■□□□□ 0.74
CCDC47-204ENST00000582252 GMPPAQ96IJ6 420 aaPredicted RBP19.65■□□□□ 0.74
CCDC47-204ENST00000582252 PCDHB16Q9NRJ7 776 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 PLSCR3Q9NRY6 295 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 B3GNT2Q9NY97 397 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 KCNK7Q9Y2U2 307 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 BOLA1Q9Y3E2 137 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 PIEZO2Q9H5I5 2752 aa19.65■□□□□ 0.74
CCDC47-204ENST00000582252 FAM230AA0A1W2PPH8 454 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms