RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 AP1S2P56377 157 aa2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 KRTAP12-3P60328 96 aa2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 KDSRQ06136 332 aa2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 RWDD4Q6NW29 188 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 ADM2Q7Z4H4 148 aa2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 ORMDL3Q8N138 153 aa2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 INO80EQ8NBZ0 244 aaPredicted RBP2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 BAALCQ8WXS3 180 aa2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 HGDQ93099 445 aa2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 ISOC2Q96AB3 205 aa2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 CHID1Q9BWS9 393 aa2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 LOC100653049A0A140TA62 436 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 ISPDA4D126 451 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 XRCC2O43543 280 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 MPDU1O75352 247 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 KRT34O76011 436 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 KLHL2O95198 593 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 FARS2O95363 451 aaKnown RBP2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 SNAI1O95863 264 aaPredicted RBP2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 THRAP10827 490 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 NELFEP18615 380 aaKnown RBP2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 GABRR2P28476 465 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 OR2B8PP59922 312 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 DNAJC3Q13217 504 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 TRIP11Q15643 1979 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 NKAIN1Q4KMZ8 207 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 C6orf99Q4VX62 202 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 CAVIN4Q5BKX8 364 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 AK9Q5TCS8 1911 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 LINC00523Q86TU6 105 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 UNC93AQ86WB7 457 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 OR4M2Q8NGB6 313 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 ASZ1Q8WWH4 475 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 TMEM159Q96B96 161 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 TM2D3Q9BRN9 247 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 SFXN3Q9BWM7 321 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 KIAA1671Q9BY89 1806 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 IL22Q9GZX6 179 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 PLEKHF2Q9H8W4 249 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 FBXO8Q9NRD0 319 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 MCUBQ9NWR8 336 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 RWDD2AQ9UIY3 292 aa2.04□□□□□ -2.08
SMCHD1-204ENST00000581226 SHROOM3Q8TF72 1996 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 TNIKQ9UKE5 1360 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 CCL15-CCL14A0A0B4J2E2 113 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 H3BN98 237 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 BOLA2-SMG1P6H3BVE0 249 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 GMDSO60547 372 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 MAS1P04201 325 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 BCAP31P51572 246 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 PPP1CAP62136 330 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 CCL15Q16663 113 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 TMEM69Q5SWH9 247 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 TMEM236Q5W0B7 351 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 DAZ4Q86SG3 579 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 RAB43Q86YS6 212 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 SLC25A29Q8N8R3 303 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 SLC26A10Q8NG04 563 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 OR52N1Q8NH53 320 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 OR8D1Q8WZ84 308 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 TFGQ92734 400 aaPredicted RBP2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 SCGB3A2Q96PL1 93 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 REEP1Q9H902 201 aa2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 DAZ1Q9NQZ3 744 aaKnown RBP2.03□□□□□ -2.08
SMCHD1-204ENST00000581226 BAZ2AQ9UIF9 1905 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 LINC01619G3V211 115 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 CLDN34H7C241 214 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 ZNF701M0R085 212 aaPredicted RBP2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 KDELR3O43731 214 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 OTCP00480 354 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 PRKACAP17612 351 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 LGALS3P17931 250 aaKnown RBP2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 PMCHP20382 165 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 MSR1P21757 451 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 HLA-DMAP28067 261 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 CLDN6P56747 220 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 BIKQ13323 160 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 IHHQ14623 411 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 SP6Q3SY56 376 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 OR2T5Q6IEZ7 315 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 C16orf87Q6PH81 154 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 DAW1Q8N136 415 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 OR4A15Q8NGL6 344 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 OR2T29Q8NH02 315 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 PIH1D2Q8WWB5 315 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 CACNG8Q8WXS5 425 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 PDCD1LG2Q9BQ51 273 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 DDX19BQ9UMR2 479 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 OR51B2Q9Y5P1 312 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 DYSFO75923 2080 aa2.02□□□□□ -2.09
SMCHD1-204ENST00000581226 RPRD2Q5VT52 1461 aaKnown RBP2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 A0A1W2PPV4 95 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 PSPHP1O15172 72 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 PTHP01270 115 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 MMP7P09237 267 aaPredicted RBP2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 MPIP34949 423 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 TAS2R39P59534 338 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 OR1Q1Q15612 314 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 DEFB134Q4QY38 66 aa2.01□□□□□ -2.09
SMCHD1-204ENST00000581226 TPRG1LQ5T0D9 272 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms