RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 MPIG6BO95866 241 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 CECR9P0C854 216 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 UBBP0CG47 229 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 PTGFRP43088 359 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 SRP9P49458 86 aaKnown RBP9.05□□□□□ -0.96
SS18-217ENST00000580958 FUT6P51993 359 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 ATP1B3P54709 279 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 MTCP1P56278 107 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 ZP1P60852 638 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 PPP1CBP62140 327 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 LY6DQ14210 128 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 MOGAT2Q3SYC2 334 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 HACD4Q5VWC8 232 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 MZT2BQ6NZ67 158 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 CCBE1Q6UXH8 406 aaPredicted RBP9.05□□□□□ -0.96
SS18-217ENST00000580958 C1QL2Q7Z5L3 287 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 NRARPQ7Z6K4 114 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 LIX1LQ8IVB5 337 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 KDF1Q8NAX2 398 aaPredicted RBP9.05□□□□□ -0.96
SS18-217ENST00000580958 ACBD4Q8NC06 268 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 RELL2Q8NC24 303 aaPredicted RBP9.05□□□□□ -0.96
SS18-217ENST00000580958 OR10K1Q8NGX5 313 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 SLC25A40Q8TBP6 338 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 C15orf40Q8WUR7 153 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 S100PBPQ96BU1 408 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 WBP1Q96G27 269 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 TECTBQ96PL2 329 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 NEDD4LQ96PU5 975 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 PAPOLGQ9BWT3 736 aaKnown RBP9.05□□□□□ -0.96
SS18-217ENST00000580958 SLC22A4Q9H015 551 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 BANF2Q9H503 90 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 FAIMQ9NVQ4 179 aa9.05□□□□□ -0.96
SS18-217ENST00000580958 TPRP12270 2363 aaKnown RBP9.04□□□□□ -0.96
SS18-217ENST00000580958 A0A0A6YYD4 124 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 A0A0A6YYH2 397 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 TRGV8A0A0C4DH27 118 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 MEIOCA2RUB1 952 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 METTL21EPA6NDL7 271 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 A6NJ64 397 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 J3QW42 95 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 LYRM1O43325 122 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 SPRY1O43609 319 aaPredicted RBP9.04□□□□□ -0.96
SS18-217ENST00000580958 ICMTO60725 284 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 CDC14BO60729 498 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 CRTAPO75718 401 aaPredicted RBP9.04□□□□□ -0.96
SS18-217ENST00000580958 CST4P01036 141 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 IGLV1-44P01699 117 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 NAT2P11245 290 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 ZNF35P13682 527 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 PSMB1P20618 241 aaKnown RBP9.04□□□□□ -0.96
SS18-217ENST00000580958 SERPINA2P20848 420 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 GDNFP39905 211 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 ALDH3B1P43353 468 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 VEGFCP49767 419 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 RBP2P50120 134 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 ZNF83P51522 516 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 ERVS71-1P61550 626 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 MRPS10P82664 201 aaKnown RBP9.04□□□□□ -0.96
SS18-217ENST00000580958 FAM27E3Q08E93 113 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 GPR176Q14439 515 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 SLC22A6Q4U2R8 563 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 TIMM23BQ5SRD1 257 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 OR2T2Q6IF00 324 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 ALKBH2Q6NS38 261 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 MRGPRGQ86SM5 289 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 ZDHHC23Q8IYP9 409 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 TMEM104Q8NE00 496 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 OR1J1Q8NGS3 322 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 KCNG3Q8TAE7 436 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 ENKURQ8TC29 256 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 FCAMRQ8WWV6 532 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 DVL3Q92997 716 aaPredicted RBP9.04□□□□□ -0.96
SS18-217ENST00000580958 ITFG2Q969R8 447 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 CMBLQ96DG6 245 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 CPNE2Q96FN4 548 aaPredicted RBP9.04□□□□□ -0.96
SS18-217ENST00000580958 RNF170Q96K19 258 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 DMRTA2Q96SC8 542 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 S100A13Q99584 98 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 FGF23Q9GZV9 251 aaPredicted RBP9.04□□□□□ -0.96
SS18-217ENST00000580958 LPAR5Q9H1C0 372 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 ELL3Q9HB65 397 aaPredicted RBP9.04□□□□□ -0.96
SS18-217ENST00000580958 MRPL15Q9P015 296 aaKnown RBP9.04□□□□□ -0.96
SS18-217ENST00000580958 CACNG2Q9Y698 323 aa9.04□□□□□ -0.96
SS18-217ENST00000580958 CHD3Q12873 2000 aaKnown RBP9.04□□□□□ -0.96
SS18-217ENST00000580958 PKD1L2Q7Z442 2459 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 IGHV2OR16-5A0A0B4J2B6 119 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 WIPF3A6NGB9 483 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 ANKRD30BLA7E2S9 258 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 RAB27BO00194 218 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 ANGPTL7O43827 346 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 ORC5O43913 435 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 LILRA1O75019 489 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 PLATP00750 562 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 TMEM225BP0DP42 221 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 SFTPCP11686 197 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 CALCRP30988 508 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 KIR2DL3P43628 341 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 CASP6P55212 293 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 UCP2P55851 309 aa9.03□□□□□ -0.96
SS18-217ENST00000580958 KLF9Q13886 244 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms