RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 ACTR6Q9GZN1 396 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CHST6Q9GZX3 395 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SDHAF2Q9NX18 166 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF319Q9P2F9 582 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 UPB1Q9UBR1 384 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SH3BGRL2Q9UJC5 107 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF503-AS2A6NEH8 195 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 TUBAL3A6NHL2 446 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF724A8MTY0 619 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 F5H5K5 113 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ISG15P05161 165 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 VSIG10L2P0DP72 767 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 GTF2F2P13984 249 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 IGFBP3P17936 291 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SCAND1P57086 179 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 TSPAN5P62079 268 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OPCMLQ14982 345 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 TSC22D1Q15714 1073 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ACSF3Q4G176 576 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 VWA1Q6PCB0 445 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SEZ6L2Q6UXD5 910 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SLC22A24Q8N4F4 322 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF283Q8N7M2 679 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OR4C16Q8NGL9 310 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OR6M1Q8NGM8 313 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OR13C9Q8NGT0 318 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FAM46BQ96A09 425 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FAM71F1Q96KD3 344 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ASF1BQ9NVP2 202 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PARPBPQ9NWS1 579 aa11.06□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MEGF11A6BM72 1044 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 NAP1L6A6NFF2 107 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MFSD2BA6NFX1 497 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 TOR1AO14656 332 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FSTP19883 344 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PRSS3P35030 304 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 UCNP55089 124 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MRPS34P82930 218 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 KCNMB1Q16558 191 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RSPO1Q2MKA7 263 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 NHLRC3Q5JS37 347 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF774Q6NX45 483 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RTN4RL2Q86UN3 420 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CD163Q86VB7 1156 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CPT1CQ8TCG5 803 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ADAT3Q96EY9 351 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SPACA5Q96QH8 159 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF275Q9NSD4 429 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PLEK2Q9NYT0 353 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 HLA-HP01893 362 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CD3DP04234 171 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 NR2C1P13056 603 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF20P17024 532 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF32P17041 273 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PRSS12P56730 875 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF121P58317 390 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 TUSC1Q2TAM9 212 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FAM27BQ5VT28 67 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RTL6Q6ICC9 239 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ACBD4Q8NC06 268 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OR4D6Q8NGJ1 314 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OR51S1Q8NGJ8 323 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MS4A7Q9GZW8 240 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PIPOXQ9P0Z9 390 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 COL6A6A6NMZ7 2263 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 A0A1W2PR80 420 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 H7C417 338 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CRYABP02511 175 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CSN2P05814 226 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 BDKRB2P30411 391 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FAUP35544 74 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 NUP62P37198 522 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SLC6A9P48067 706 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CX3CR1P49238 355 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 LSM6P62312 80 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MOGAT2Q3SYC2 334 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SFRP5Q5T4F7 317 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RIPPLY2Q5TAB7 128 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RPUSD3Q6P087 351 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FOXL2NBQ6ZUU3 175 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FAM57BQ71RH2 274 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OR52N4Q8NGI2 321 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OR1J2Q8NGS2 313 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SLC25A28Q96A46 364 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CXorf58Q96LI9 332 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 GINS4Q9BRT9 223 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MTFP1Q9UDX5 166 aa11.05□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZGRF1Q86YA3 2104 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PRR14LQ5THK1 2151 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 LOC100509620A0A075B734 347 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF587BE7ETH6 402 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 M0QYG6 137 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CCL2P13500 99 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CXCL2P19875 107 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 KIR2DL2P43627 348 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PSMA6P60900 246 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 LY6DQ14210 128 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PPA1Q15181 289 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 HIKESHIQ53FT3 197 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF324BQ6AW86 544 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms