RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 SSX3Q99909 188 aa12.16□□□□□ -0.46
RNF43-202ENST00000577625 NAA11Q9BSU3 229 aaPredicted RBP12.16□□□□□ -0.46
RNF43-202ENST00000577625 TOLLIPQ9H0E2 274 aa12.16□□□□□ -0.46
RNF43-202ENST00000577625 ACKR4Q9NPB9 350 aa12.16□□□□□ -0.46
RNF43-202ENST00000577625 ASH2LQ9UBL3 628 aa12.16□□□□□ -0.46
RNF43-202ENST00000577625 ZNF726A6NNF4 738 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 TRAPPC6AO75865 159 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 RLN1P04808 185 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 NDUFB7P17568 137 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 MAGEB1P43366 347 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 PTH2RP49190 550 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 POU3F4P49335 361 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 RBP2P50120 134 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 SLC25A47Q6Q0C1 308 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 DEGS2Q6QHC5 323 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 REC114Q7Z4M0 266 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 DCXRQ7Z4W1 244 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 ARRDC1Q8N5I2 433 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 STOML3Q8TAV4 291 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 GPR148Q8TDV2 347 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 THRSPQ92748 146 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 LURAP1Q96LR2 239 aa12.15□□□□□ -0.46
RNF43-202ENST00000577625 ZNF703Q9H7S9 590 aaPredicted RBP12.15□□□□□ -0.46
RNF43-202ENST00000577625 RCC2Q9P258 522 aaKnown RBP12.15□□□□□ -0.46
RNF43-202ENST00000577625 AK6Q9Y3D8 172 aaKnown RBP12.15□□□□□ -0.46
RNF43-202ENST00000577625 TMEM127O75204 238 aa12.15□□□□□ -0.47
RNF43-202ENST00000577625 PNPP00491 289 aa12.15□□□□□ -0.47
RNF43-202ENST00000577625 ANXA2P07355 339 aaKnown RBP12.15□□□□□ -0.47
RNF43-202ENST00000577625 NR2C1P13056 603 aa12.15□□□□□ -0.47
RNF43-202ENST00000577625 NQO2P16083 231 aa12.15□□□□□ -0.47
RNF43-202ENST00000577625 GFRA1P56159 465 aa12.15□□□□□ -0.47
RNF43-202ENST00000577625 CLDN17P56750 224 aa12.15□□□□□ -0.47
RNF43-202ENST00000577625 PLEKHN1Q494U1 663 aaPredicted RBP12.15□□□□□ -0.47
RNF43-202ENST00000577625 LBHQ53QV2 105 aaPredicted RBP12.15□□□□□ -0.47
RNF43-202ENST00000577625 CARD17Q5XLA6 110 aa12.15□□□□□ -0.47
RNF43-202ENST00000577625 ACOT7LQ6ZUV0 252 aa12.15□□□□□ -0.47
RNF43-202ENST00000577625 TMPRSS7Q7RTY8 843 aa12.15□□□□□ -0.47
RNF43-202ENST00000577625 OR10H5Q8NGA6 315 aa12.15□□□□□ -0.47
RNF43-202ENST00000577625 ADGRG7Q96K78 797 aa12.15□□□□□ -0.47
RNF43-202ENST00000577625 SMAD5Q99717 465 aaKnown RBP12.15□□□□□ -0.47
RNF43-202ENST00000577625 CHMP1AQ9HD42 196 aaPredicted RBP12.15□□□□□ -0.47
RNF43-202ENST00000577625 TMEM100Q9NV29 134 aa12.15□□□□□ -0.47
RNF43-202ENST00000577625 TRBV5-7A0A0A0MS05 114 aa12.14□□□□□ -0.47
RNF43-202ENST00000577625 EIF1AYO14602 144 aaKnown RBP12.14□□□□□ -0.47
RNF43-202ENST00000577625 SMAD9O15198 467 aaKnown RBP12.14□□□□□ -0.47
RNF43-202ENST00000577625 TLX3O43711 291 aaPredicted RBP12.14□□□□□ -0.47
RNF43-202ENST00000577625 SRSF10O75494 262 aaKnown RBP12.14□□□□□ -0.47
RNF43-202ENST00000577625 RAC3P60763 192 aa12.14□□□□□ -0.47
RNF43-202ENST00000577625 CATSPERDQ86XM0 798 aa12.14□□□□□ -0.47
RNF43-202ENST00000577625 LINC00346Q8IVM7 164 aa12.14□□□□□ -0.47
RNF43-202ENST00000577625 SULF2Q8IWU5 870 aa12.14□□□□□ -0.47
RNF43-202ENST00000577625 MDS2Q8NDY4 140 aa12.14□□□□□ -0.47
RNF43-202ENST00000577625 OR4A4PQ8NGN8 299 aa12.14□□□□□ -0.47
RNF43-202ENST00000577625 RNF133Q8WVZ7 376 aa12.14□□□□□ -0.47
RNF43-202ENST00000577625 MCHR2Q969V1 340 aa12.14□□□□□ -0.47
RNF43-202ENST00000577625 NRIP2Q9BQI9 281 aa12.14□□□□□ -0.47
RNF43-202ENST00000577625 URB1O60287 2271 aaKnown RBP12.14□□□□□ -0.47
RNF43-202ENST00000577625 METTL21EPA6NDL7 271 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 ZNF705EA8MWA4 302 aaPredicted RBP12.13□□□□□ -0.47
RNF43-202ENST00000577625 FARS2O95363 451 aaKnown RBP12.13□□□□□ -0.47
RNF43-202ENST00000577625 CD2P06729 351 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 SOX2P48431 317 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 SUCLG1P53597 346 aaKnown RBP12.13□□□□□ -0.47
RNF43-202ENST00000577625 MFGE8Q08431 387 aaPredicted RBP12.13□□□□□ -0.47
RNF43-202ENST00000577625 MFAP5Q13361 173 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 GFOD2Q3B7J2 385 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 ANKRD39Q53RE8 183 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 TMEM69Q5SWH9 247 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 OR52W1Q6IF63 320 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 C11orf87Q6NUJ2 197 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 STAC2Q6ZMT1 411 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 OR9K2Q8NGE7 335 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 OR6N1Q8NGY5 312 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 OR10AC1Q8NH08 325 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 SLC25A38Q96DW6 304 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 S100A16Q96FQ6 103 aaKnown RBP12.13□□□□□ -0.47
RNF43-202ENST00000577625 ZNF385AQ96PM9 386 aaKnown RBP12.13□□□□□ -0.47
RNF43-202ENST00000577625 NEU1Q99519 415 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 GFI1Q99684 422 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 OCSTAMPQ9BR26 566 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 SLITRK2Q9H156 845 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 SLC25A18Q9H1K4 315 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 SEC61A2Q9H9S3 476 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 DLL3Q9NYJ7 618 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 FOXJ3Q9UPW0 622 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 R4GMQ9 66 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 SPTBN2O15020 2390 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 OR5H15A6NDH6 313 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 GGT3PA6NGU5 568 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 OR5H14A6NHG9 310 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 NPIPA2E9PIF3 369 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 NPIPA3F8WFD2 350 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 NKX2-8O15522 239 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 WT1P19544 449 aaPredicted RBP12.13□□□□□ -0.47
RNF43-202ENST00000577625 RRADP55042 308 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 CLDN15P56746 228 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 SOX8P57073 446 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 PJVKQ0ZLH3 352 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 LY6G6FQ5SQ64 297 aa12.13□□□□□ -0.47
RNF43-202ENST00000577625 TMEM244Q5VVB8 128 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms