RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 HIST1H2AAQ96QV6 131 aa10.81□□□□□ -0.68
COPS3-214ENST00000577246 FUZQ9BT04 418 aa10.81□□□□□ -0.68
COPS3-214ENST00000577246 WNT10AQ9GZT5 417 aa10.81□□□□□ -0.68
COPS3-214ENST00000577246 F2RL2O00254 374 aa10.8□□□□□ -0.68
COPS3-214ENST00000577246 ZNF593O00488 134 aaPredicted RBP10.8□□□□□ -0.68
COPS3-214ENST00000577246 NME4O00746 187 aa10.8□□□□□ -0.68
COPS3-214ENST00000577246 VDAC2P45880 294 aaPredicted RBP10.8□□□□□ -0.68
COPS3-214ENST00000577246 RPL31P62899 125 aaKnown RBP10.8□□□□□ -0.68
COPS3-214ENST00000577246 TSPAN31Q12999 210 aa10.8□□□□□ -0.68
COPS3-214ENST00000577246 PRDX4Q13162 271 aa10.8□□□□□ -0.68
COPS3-214ENST00000577246 FAM76BQ5HYJ3 339 aa10.8□□□□□ -0.68
COPS3-214ENST00000577246 FAM57BQ71RH2 274 aa10.8□□□□□ -0.68
COPS3-214ENST00000577246 TIGD4Q8IY51 512 aa10.8□□□□□ -0.68
COPS3-214ENST00000577246 ZNRF1Q8ND25 227 aa10.8□□□□□ -0.68
COPS3-214ENST00000577246 RP9Q8TA86 221 aaKnown RBP10.8□□□□□ -0.68
COPS3-214ENST00000577246 GNPDA2Q8TDQ7 276 aa10.8□□□□□ -0.68
COPS3-214ENST00000577246 OR5P3Q8WZ94 311 aa10.8□□□□□ -0.68
COPS3-214ENST00000577246 RNF170Q96K19 258 aa10.8□□□□□ -0.68
COPS3-214ENST00000577246 ELL3Q9HB65 397 aaPredicted RBP10.8□□□□□ -0.68
COPS3-214ENST00000577246 USE1Q9NZ43 259 aa10.8□□□□□ -0.68
COPS3-214ENST00000577246 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.8□□□□□ -0.68
COPS3-214ENST00000577246 GMPR2Q9P2T1 348 aaKnown RBP10.8□□□□□ -0.68
COPS3-214ENST00000577246 TBL2Q9Y4P3 447 aaKnown RBP10.8□□□□□ -0.68
COPS3-214ENST00000577246 NOTCH3Q9UM47 2321 aa10.8□□□□□ -0.68
COPS3-214ENST00000577246 A0A1W2PRX2 142 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 DHRS12A0PJE2 317 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 DIRAS1O95057 198 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 CST4P01036 141 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 NCK1P16333 377 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 COX7A1P24310 79 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 PAX6P26367 422 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 GSSP48637 474 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 ZNF121P58317 390 aaPredicted RBP10.79□□□□□ -0.68
COPS3-214ENST00000577246 EIF2B1Q14232 305 aaKnown RBP10.79□□□□□ -0.68
COPS3-214ENST00000577246 ZDHHC23Q8IYP9 409 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 OR51L1Q8NGJ5 315 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 ZNF671Q8TAW3 534 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 MCUR1Q96AQ8 359 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 MALSU1Q96EH3 234 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 SDSLQ96GA7 329 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 PGAM5Q96HS1 289 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 OR5M11Q96RB7 305 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 B9D2Q9BPU9 175 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 DCAF13Q9NV06 445 aaKnown RBP10.79□□□□□ -0.68
COPS3-214ENST00000577246 RASL12Q9NYN1 266 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 CDH10Q9Y6N8 788 aa10.79□□□□□ -0.68
COPS3-214ENST00000577246 IGKV1D-17A0A075B6S4 117 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 A6NDX4 124 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 FAM90A8PA6NJQ4 464 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 ZNF850A8MQ14 1090 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 SLC1A7O00341 560 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 TFF1P04155 84 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 PSG2P11465 335 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 PSKH1P11801 424 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 MSX2P35548 267 aaPredicted RBP10.78□□□□□ -0.68
COPS3-214ENST00000577246 SLC25A1P53007 311 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 CD83Q01151 205 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 KLHL12Q53G59 568 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 LYPD4Q6UWN0 246 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 THAP5Q7Z6K1 395 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 TMEM219Q86XT9 240 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 CALHM1Q8IU99 346 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 ZNF561Q8N587 486 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 OR5AU1Q8NGC0 362 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 OR6K6Q8NGW6 343 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 RNF133Q8WVZ7 376 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 PPP1R3EQ9H7J1 279 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 EFCAB1Q9HAE3 211 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 C19orf12Q9NSK7 152 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 DNAJC27Q9NZQ0 273 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 ZNF222Q9UK12 451 aa10.78□□□□□ -0.68
COPS3-214ENST00000577246 TSSC4Q9Y5U2 329 aaPredicted RBP10.78□□□□□ -0.68
COPS3-214ENST00000577246 AZGP1P25311 298 aaKnown RBP10.77□□□□□ -0.69
COPS3-214ENST00000577246 DCTDP32321 178 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 GPM6AP51674 278 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 DYNLT3P51808 116 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 GNG3P63215 75 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 SMIM21Q3B7S5 101 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 PLA1AQ53H76 456 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 TMEM200BQ69YZ2 307 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 GLYATQ6IB77 296 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 PRSS45Q7RTY3 260 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.77□□□□□ -0.69
COPS3-214ENST00000577246 ZNF511Q8NB15 262 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 SLC37A3Q8NCC5 494 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 OR13D1Q8NGV5 346 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 PIGCQ92535 297 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 ITFG2Q969R8 447 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 C1orf21Q9H246 121 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 BRD7Q9NPI1 651 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 ZMAT5Q9UDW3 170 aaKnown RBP10.77□□□□□ -0.69
COPS3-214ENST00000577246 TENM3Q9P273 2699 aa10.77□□□□□ -0.69
COPS3-214ENST00000577246 DNAH3Q8TD57 4116 aa10.76□□□□□ -0.69
COPS3-214ENST00000577246 WI2-2373I1.2A0A1W2PRP0 233 aa10.76□□□□□ -0.69
COPS3-214ENST00000577246 TCRBV4S1A1TA0A5B7 111 aa10.76□□□□□ -0.69
COPS3-214ENST00000577246 RHBDL1O75783 438 aa10.76□□□□□ -0.69
COPS3-214ENST00000577246 IFNGP01579 166 aa10.76□□□□□ -0.69
COPS3-214ENST00000577246 ARG1P05089 322 aa10.76□□□□□ -0.69
COPS3-214ENST00000577246 H2BFMP0C1H6 154 aa10.76□□□□□ -0.69
COPS3-214ENST00000577246 SPI1P17947 270 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms