RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 FXYD1O00168 92 aa13.02□□□□□ -0.33
CTDNEP1-211ENST00000575783 GSK3AP49840 483 aa13.02□□□□□ -0.33
CTDNEP1-211ENST00000575783 IFI44LQ53G44 452 aa13.02□□□□□ -0.33
CTDNEP1-211ENST00000575783 LDLRAD2Q5SZI1 272 aa13.02□□□□□ -0.33
CTDNEP1-211ENST00000575783 CYP4Z1Q86W10 505 aa13.02□□□□□ -0.33
CTDNEP1-211ENST00000575783 SLAMF6Q96DU3 332 aa13.02□□□□□ -0.33
CTDNEP1-211ENST00000575783 RNF170Q96K19 258 aa13.02□□□□□ -0.33
CTDNEP1-211ENST00000575783 IFT27Q9BW83 186 aa13.02□□□□□ -0.33
CTDNEP1-211ENST00000575783 ANKRD19PQ9H560 264 aa13.02□□□□□ -0.33
CTDNEP1-211ENST00000575783 PALMDQ9NP74 551 aa13.02□□□□□ -0.33
CTDNEP1-211ENST00000575783 USE1Q9NZ43 259 aa13.02□□□□□ -0.33
CTDNEP1-211ENST00000575783 ZNF850A8MQ14 1090 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 FAM220BPB1ANY3 271 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 H0YHG0 523 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 PSKH1P11801 424 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 LYL1P12980 280 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 SLC6A6P31641 620 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 OR12D2P58182 307 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 SLC34A1Q06495 639 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 DYNC1I2Q13409 638 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 SLC35F1Q5T1Q4 408 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 LYPD4Q6UWN0 246 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 ETV3LQ6ZN32 361 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 PIGWQ7Z7B1 504 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 PROKR2Q8NFJ6 384 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 FANK1Q8TC84 345 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 PARD6BQ9BYG5 372 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 TBL2Q9Y4P3 447 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 LSM4Q9Y4Z0 139 aaKnown RBP13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 LRP12Q9Y561 859 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 HILPDAQ9Y5L2 63 aa13.01□□□□□ -0.33
CTDNEP1-211ENST00000575783 hCG_38984A0A1B0GV85 526 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 TMEM210A6NLX4 147 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 H3BUI4 141 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 ARPC3O15145 178 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 LPLP06858 475 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 H1F0P07305 194 aaKnown RBP13□□□□□ -0.33
CTDNEP1-211ENST00000575783 SPARCP09486 303 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 CX3CR1P49238 355 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 PRDX4Q13162 271 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 KLHL12Q53G59 568 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 LINC00471Q8N535 108 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 CSNK2A3Q8NEV1 391 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 OR51D1Q8NGF3 324 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 OR52H1Q8NGJ2 320 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 OR51L1Q8NGJ5 315 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 OR2T27Q8NH04 317 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 OR5P3Q8WZ94 311 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 SDSLQ96GA7 329 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 HSH2DQ96JZ2 352 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 LYZL4Q96KX0 146 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 PRR25Q96S07 402 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 C1orf21Q9H246 121 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 OR52D1Q9H346 318 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 ZNF222Q9UK12 451 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 MPC1Q9Y5U8 109 aa13□□□□□ -0.33
CTDNEP1-211ENST00000575783 TRBV4-1A0A0J9YWV2 114 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 A0A1W2PRQ8 180 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 CEBPDP49716 269 aaPredicted RBP12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 DYNLT3P51808 116 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 DGCR6Q14129 220 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 ZNF273Q14593 569 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 SEC23BQ15437 767 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 KCTD18Q6PI47 426 aaPredicted RBP12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 FAM57BQ71RH2 274 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 MEPCEQ7L2J0 689 aaKnown RBP12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 THAP5Q7Z6K1 395 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 FTMTQ8N4E7 242 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 Q8NFD4 153 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 OR13D1Q8NGV5 346 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 OR52J3Q8NH60 311 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 ZNRF4Q8WWF5 429 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 PIGCQ92535 297 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 FGF23Q9GZV9 251 aaPredicted RBP12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 BRD7Q9NPI1 651 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 KRCC1Q9NPI7 259 aaPredicted RBP12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 DNAJC27Q9NZQ0 273 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 GMPR2Q9P2T1 348 aaKnown RBP12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 ENPP4Q9Y6X5 453 aa12.99□□□□□ -0.33
CTDNEP1-211ENST00000575783 ODF3BA8MYP8 253 aa12.98□□□□□ -0.33
CTDNEP1-211ENST00000575783 MRASO14807 208 aa12.98□□□□□ -0.33
CTDNEP1-211ENST00000575783 RAMP3O60896 148 aa12.98□□□□□ -0.33
CTDNEP1-211ENST00000575783 PIPP12273 146 aaPredicted RBP12.98□□□□□ -0.33
CTDNEP1-211ENST00000575783 CFL1P23528 166 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-211ENST00000575783 AZGP1P25311 298 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-211ENST00000575783 THBS3P49746 956 aa12.98□□□□□ -0.33
CTDNEP1-211ENST00000575783 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.98□□□□□ -0.33
CTDNEP1-211ENST00000575783 ABCA11PQ4W5N1 156 aa12.98□□□□□ -0.33
CTDNEP1-211ENST00000575783 FAM76BQ5HYJ3 339 aa12.98□□□□□ -0.33
CTDNEP1-211ENST00000575783 TIGD4Q8IY51 512 aa12.98□□□□□ -0.33
CTDNEP1-211ENST00000575783 CAPSLQ8WWF8 208 aa12.98□□□□□ -0.33
CTDNEP1-211ENST00000575783 TLCD1Q96CP7 247 aa12.98□□□□□ -0.33
CTDNEP1-211ENST00000575783 FAM32AQ9Y421 112 aaKnown RBP12.98□□□□□ -0.33
CTDNEP1-211ENST00000575783 MEX3AA1L020 520 aaKnown RBP12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 SH2D7A6NKC9 451 aaPredicted RBP12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 RFPL4AA6NLU0 287 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 ZNF878C9JN71 531 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 RFPL4AL1F8VTS6 287 aa12.97□□□□□ -0.33
CTDNEP1-211ENST00000575783 SLC1A7O00341 560 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms