RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 SYS1Q8N2H4 156 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 SPICQ8N5J4 248 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 CELF2-AS1Q8N7Q2 184 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 OR11L1Q8NGX0 322 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 HAVCR2Q8TDQ0 301 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 LYZL4Q96KX0 146 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 PBOV1Q9GZY1 135 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 TRIM36Q9NQ86 728 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 HIF1ANQ9NWT6 349 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 BABAM2Q9NXR7 383 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 NIPBLQ6KC79 2804 aaeCLIP11.14□□□□□ -0.63
RPAIN-216ENST00000575599 A6NLC8 198 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 TRIM64CA6NLI5 447 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 GRPP07492 148 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 JUNBP17275 347 aaPredicted RBP11.14□□□□□ -0.63
RPAIN-216ENST00000575599 MDH2P40926 338 aaKnown RBP11.14□□□□□ -0.63
RPAIN-216ENST00000575599 OR12D2P58182 307 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 MZT1Q08AG7 82 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 OR8B8Q15620 311 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 ZNF181Q2M3W8 571 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 TMEM155Q4W5P6 130 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 ARMCX4Q5H9R4 360 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 UBE2UQ5VVX9 321 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 GPR141Q7Z602 305 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 FTMTQ8N4E7 242 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 BOLLQ8N9W6 283 aaKnown RBP11.14□□□□□ -0.63
RPAIN-216ENST00000575599 SPERTQ8NA61 448 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 CSNK2A3Q8NEV1 391 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 MUL1Q969V5 352 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 ERGIC1Q969X5 290 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 OR5M11Q96RB7 305 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 MGLLQ99685 303 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 PPP1R3EQ9H7J1 279 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 ISG20L2Q9H9L3 353 aaKnown RBP11.14□□□□□ -0.63
RPAIN-216ENST00000575599 FN3KRPQ9HA64 309 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 RHBDD3Q9Y3P4 386 aa11.14□□□□□ -0.63
RPAIN-216ENST00000575599 hCG_1807616A0A1W2PRN6 198 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 LOC110117498-PIK3R3F6TDL0 507 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 PLPP2O43688 288 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 INMTO95050 263 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 RPP14O95059 124 aaKnown RBP11.13□□□□□ -0.63
RPAIN-216ENST00000575599 FAM157CP0CG43 387 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 SRD5A1P18405 259 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 ACKR3P25106 362 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 DCTDP32321 178 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 LCN2P80188 198 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 HOXA4Q00056 320 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-216ENST00000575599 BLMHQ13867 455 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 XAF1Q6GPH4 301 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 LRRC28Q86X40 367 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-216ENST00000575599 MUC20Q8N307 709 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-216ENST00000575599 C19orf18Q8NEA5 215 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 Q8TCH9 128 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 UFD1Q92890 307 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 PPP1R14AQ96A00 147 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 FAM71F1Q96KD3 344 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-216ENST00000575599 ISYNA1Q9NPH2 558 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 C14orf119Q9NWQ9 140 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 C1orf123Q9NWV4 160 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 MRM2Q9UI43 246 aaKnown RBP11.13□□□□□ -0.63
RPAIN-216ENST00000575599 ZNF391Q9UJN7 358 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 R4GMQ9 66 aa11.13□□□□□ -0.63
RPAIN-216ENST00000575599 PPIAL4EA0A075B759 164 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 TRAV20A0A0B4J274 112 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 A0A0U1RQV5 110 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 ACOD1A6NK06 481 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 ANXA2P2A6NMY6 339 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 ZNF850A8MQ14 1090 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 CEACAM18A8MTB9 384 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 PPIAL4DF5H284 164 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 PNPP00491 289 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 TFAP2AP05549 437 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 PPIAL4FP0DN26 164 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 RPS2P15880 293 aaKnown RBP11.12□□□□□ -0.63
RPAIN-216ENST00000575599 SEC61A1P61619 476 aaKnown RBP11.12□□□□□ -0.63
RPAIN-216ENST00000575599 MLLT11Q13015 90 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-216ENST00000575599 PRDX4Q13162 271 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 SYT6Q5T7P8 510 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-216ENST00000575599 BCL2L15Q5TBC7 163 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 FAHD2BQ6P2I3 314 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-216ENST00000575599 ZNF826PQ6ZT77 177 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 WDR86Q86TI4 376 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 OR51E1Q8TCB6 317 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 PIGCQ92535 297 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 FAHD2AQ96GK7 314 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 ZNF649Q9BS31 505 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 MOB1AQ9H8S9 216 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 PATZ1Q9HBE1 687 aaKnown RBP11.12□□□□□ -0.63
RPAIN-216ENST00000575599 GPR84Q9NQS5 396 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 ACOXLQ9NUZ1 547 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 RNF7Q9UBF6 113 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 NUFIP1Q9UHK0 495 aaKnown RBP11.12□□□□□ -0.63
RPAIN-216ENST00000575599 LSM2Q9Y333 95 aaKnown RBP11.12□□□□□ -0.63
RPAIN-216ENST00000575599 PPIAL4AQ9Y536 164 aa11.12□□□□□ -0.63
RPAIN-216ENST00000575599 PNMA8CA0A1B0GUJ8 204 aa11.11□□□□□ -0.63
RPAIN-216ENST00000575599 KIAA1324LA8MWY0 1029 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-216ENST00000575599 NOL3O60936 208 aaKnown RBP11.11□□□□□ -0.63
RPAIN-216ENST00000575599 SRSF10O75494 262 aaKnown RBP11.11□□□□□ -0.63
RPAIN-216ENST00000575599 PTBP3O95758 552 aaKnown RBP11.11□□□□□ -0.63
RPAIN-216ENST00000575599 TTRP02766 147 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms