RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 DOCK11Q5JSL3 2073 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 hCG_38984A0A1B0GV85 526 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 A0A1W2PRX2 142 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 TCRBV4S1A1TA0A5B7 111 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 TVP23AA6NH52 213 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 C3orf84H3BNL1 204 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 ZNF593O00488 134 aaPredicted RBP7.26□□□□□ -1.25
SMG6-218ENST00000575454 AKR7A2O43488 359 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 GMNNO75496 209 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 RHBDL1O75783 438 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 CST4P01036 141 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 SPARCP09486 303 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 GLRA1P23415 457 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 AZGP1P25311 298 aaKnown RBP7.26□□□□□ -1.25
SMG6-218ENST00000575454 RPS27P42677 84 aaKnown RBP7.26□□□□□ -1.25
SMG6-218ENST00000575454 CX3CR1P49238 355 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 ENTPD1P49961 510 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 DYNLT3P51808 116 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 SLC25A1P53007 311 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 KRTAP10-11P60412 298 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 RPL31P62899 125 aaKnown RBP7.26□□□□□ -1.25
SMG6-218ENST00000575454 COL10A1Q03692 680 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 KLF10Q13118 480 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 SEC23BQ15437 767 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 SLC35F1Q5T1Q4 408 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 RPL13AP3Q6NVV1 102 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 CENPVQ7Z7K6 275 aaPredicted RBP7.26□□□□□ -1.25
SMG6-218ENST00000575454 SLC15A3Q8IY34 581 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 TIGD4Q8IY51 512 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 ZNRF1Q8ND25 227 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 OR52L1Q8NGH7 329 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 OR13D1Q8NGV5 346 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 OR52J3Q8NH60 311 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 ZNF671Q8TAW3 534 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 OR5P3Q8WZ94 311 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 RPL3LQ92901 407 aaKnown RBP7.26□□□□□ -1.25
SMG6-218ENST00000575454 ITFG2Q969R8 447 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 AKR1E2Q96JD6 320 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 RNF170Q96K19 258 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 ATP6V1G3Q96LB4 118 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 DHRS1Q96LJ7 313 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 MCRIP2Q9BUT9 160 aaKnown RBP7.26□□□□□ -1.25
SMG6-218ENST00000575454 CMTM6Q9NX76 183 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 SACSQ9NZJ4 4579 aa7.26□□□□□ -1.25
SMG6-218ENST00000575454 STAB2Q8WWQ8 2551 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 TET2Q6N021 2002 aaPredicted RBP7.25□□□□□ -1.25
SMG6-218ENST00000575454 HYDINQ4G0P3 5121 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 IGKV1D-17A0A075B6S4 117 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 SLC1A7O00341 560 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 SLC22A2O15244 555 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 SYNGR1O43759 233 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 EDF1O60869 148 aaKnown RBP7.25□□□□□ -1.25
SMG6-218ENST00000575454 PSG2P11465 335 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 ANOS1P23352 680 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 COX7A1P24310 79 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 PYCR1P32322 319 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 OR12D2P58182 307 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 PRDX4Q13162 271 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 GFOD2Q3B7J2 385 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 TMEM200BQ69YZ2 307 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 UNQ9370/PRO34162Q6UXP9 181 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 FAM57BQ71RH2 274 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 THAP5Q7Z6K1 395 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 TMEM219Q86XT9 240 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 ZDHHC23Q8IYP9 409 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 OR4X2Q8NGF9 303 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 CAPSLQ8WWF8 208 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 PGAM5Q96HS1 289 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 C7orf34Q96L11 122 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 FUZQ9BT04 418 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 C1orf21Q9H246 121 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 MUC13Q9H3R2 512 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 FN3KQ9H479 309 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 SAR1AQ9NR31 198 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 C19orf12Q9NSK7 152 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 ZNF222Q9UK12 451 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 SAMD4AQ9UPU9 718 aaKnown RBP7.25□□□□□ -1.25
SMG6-218ENST00000575454 COMMD3-BMI1R4GMX3 469 aa7.25□□□□□ -1.25
SMG6-218ENST00000575454 TENM2Q9NT68 2774 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 DHRS12A0PJE2 317 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 ZNF850A8MQ14 1090 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 MTRF1O75570 445 aaKnown RBP7.24□□□□□ -1.25
SMG6-218ENST00000575454 ZFPL1O95159 310 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 GADD45GO95257 159 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 RBP4P02753 201 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 ARG1P05089 322 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 PAX6P26367 422 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 DCTDP32321 178 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 RAB13P51153 203 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 BLCAPP62952 87 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 TSPAN31Q12999 210 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 SSX2Q16385 188 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 SMIM21Q3B7S5 101 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 CCDC121Q6ZUS5 278 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 PRSS45Q7RTY3 260 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 C16orf82Q7Z2V1 217 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 RNF144BQ7Z419 303 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 LHFPL4Q7Z7J7 247 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 ZNF561Q8N587 486 aa7.24□□□□□ -1.25
SMG6-218ENST00000575454 C11orf42Q8N5U0 333 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms