RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 A0A0G2JMP0 313 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 A0A0X1KG70 313 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 BCKDKO14874 412 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 SYNGR2O43760 224 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 CDH16O75309 829 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 FARS2O95363 451 aaKnown RBP1.66□□□□□ -2.14
CDC27-216ENST00000574304 TDP2O95551 362 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 AGTP01019 485 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 ERCC1P07992 297 aaPredicted RBP1.66□□□□□ -2.14
CDC27-216ENST00000574304 IL5RAQ01344 420 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 ATP5G2Q06055 141 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 MERTKQ12866 999 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 MAPRE2Q15555 327 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 KLHL40Q2TBA0 621 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 STEAP4Q687X5 459 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 TMPPEQ6ZT21 453 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 TCF24Q7RTU0 167 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 OR1S1Q8NH92 325 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 RXFP2Q8WXD0 754 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 MRPL48Q96GC5 212 aaKnown RBP1.66□□□□□ -2.14
CDC27-216ENST00000574304 FAM19A4Q96LR4 140 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 RDH12Q96NR8 316 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 PEBP4Q96S96 227 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 FAM192AQ9GZU8 254 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 GEMIN7Q9H840 131 aaKnown RBP1.66□□□□□ -2.14
CDC27-216ENST00000574304 FANCEQ9HB96 536 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 FAM60AQ9NP50 221 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 RAB23Q9ULC3 237 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 SSH2Q76I76 1423 aa1.66□□□□□ -2.14
CDC27-216ENST00000574304 IGHV6-1A0A0B4J1U7 121 aa1.65□□□□□ -2.15
CDC27-216ENST00000574304 MYL12BO14950 172 aa1.65□□□□□ -2.15
CDC27-216ENST00000574304 FCN3O75636 299 aa1.65□□□□□ -2.15
CDC27-216ENST00000574304 IFNW1P05000 195 aa1.65□□□□□ -2.15
CDC27-216ENST00000574304 FOXA1P55317 472 aa1.65□□□□□ -2.15
CDC27-216ENST00000574304 HMGN5P82970 282 aaKnown RBP1.65□□□□□ -2.15
CDC27-216ENST00000574304 TPBGQ13641 420 aa1.65□□□□□ -2.15
CDC27-216ENST00000574304 TMEM220Q6QAJ8 160 aa1.65□□□□□ -2.15
CDC27-216ENST00000574304 SSX9Q7RTT3 188 aa1.65□□□□□ -2.15
CDC27-216ENST00000574304 LUZP2Q86TE4 346 aa1.65□□□□□ -2.15
CDC27-216ENST00000574304 SLC30A8Q8IWU4 369 aa1.65□□□□□ -2.15
CDC27-216ENST00000574304 WDR31Q8NA23 367 aa1.65□□□□□ -2.15
CDC27-216ENST00000574304 DERL3Q96Q80 235 aa1.65□□□□□ -2.15
CDC27-216ENST00000574304 C20orf96Q9NUD7 363 aaPredicted RBP1.65□□□□□ -2.15
CDC27-216ENST00000574304 MCUBQ9NWR8 336 aa1.65□□□□□ -2.15
CDC27-216ENST00000574304 GCNT4Q9P109 453 aa1.65□□□□□ -2.15
CDC27-216ENST00000574304 LOXHD1Q8IVV2 1947 aa1.64□□□□□ -2.15
CDC27-216ENST00000574304 COL5A3P25940 1745 aaPredicted RBP1.64□□□□□ -2.15
CDC27-216ENST00000574304 H3BQ85 93 aa1.64□□□□□ -2.15
CDC27-216ENST00000574304 CACNG3O60359 315 aa1.64□□□□□ -2.15
CDC27-216ENST00000574304 IGHMP01871 453 aa1.64□□□□□ -2.15
CDC27-216ENST00000574304 SLC1A2P43004 574 aa1.64□□□□□ -2.15
CDC27-216ENST00000574304 KRTAP12-1P59990 96 aa1.64□□□□□ -2.15
CDC27-216ENST00000574304 GRB2P62993 217 aaKnown RBP1.64□□□□□ -2.15
CDC27-216ENST00000574304 TSC22D1Q15714 1073 aa1.64□□□□□ -2.15
CDC27-216ENST00000574304 SPANXN2Q5MJ10 180 aa1.64□□□□□ -2.15
CDC27-216ENST00000574304 TRMT10CQ7L0Y3 403 aaKnown RBP1.64□□□□□ -2.15
CDC27-216ENST00000574304 ITLN2Q8WWU7 325 aaPredicted RBP1.64□□□□□ -2.15
CDC27-216ENST00000574304 RCN3Q96D15 328 aa1.64□□□□□ -2.15
CDC27-216ENST00000574304 FBXO8Q9NRD0 319 aa1.64□□□□□ -2.15
CDC27-216ENST00000574304 NDRG2Q9UN36 371 aaKnown RBP1.64□□□□□ -2.15
CDC27-216ENST00000574304 GOLGA8JA6NMD2 632 aa1.63□□□□□ -2.15
CDC27-216ENST00000574304 LINC01619G3V211 115 aa1.63□□□□□ -2.15
CDC27-216ENST00000574304 KRT16P08779 473 aa1.63□□□□□ -2.15
CDC27-216ENST00000574304 GOLGA8HP0CJ92 632 aa1.63□□□□□ -2.15
CDC27-216ENST00000574304 CBR1P16152 277 aa1.63□□□□□ -2.15
CDC27-216ENST00000574304 PTMSP20962 102 aa1.63□□□□□ -2.15
CDC27-216ENST00000574304 EIF3MQ7L2H7 374 aaKnown RBP1.63□□□□□ -2.15
CDC27-216ENST00000574304 PQLC3Q8N755 202 aa1.63□□□□□ -2.15
CDC27-216ENST00000574304 OR2M7Q8NG81 312 aa1.63□□□□□ -2.15
CDC27-216ENST00000574304 SMARCD1Q96GM5 515 aa1.63□□□□□ -2.15
CDC27-216ENST00000574304 SCGB3A2Q96PL1 93 aa1.63□□□□□ -2.15
CDC27-216ENST00000574304 NAPGQ99747 312 aaPredicted RBP1.63□□□□□ -2.15
CDC27-216ENST00000574304 AGMATQ9BSE5 352 aa1.63□□□□□ -2.15
CDC27-216ENST00000574304 API5Q9BZZ5 524 aaKnown RBP1.63□□□□□ -2.15
CDC27-216ENST00000574304 SPATA31E1Q6ZUB1 1445 aa1.63□□□□□ -2.15
CDC27-216ENST00000574304 SORL1Q92673 2214 aa1.63□□□□□ -2.15
CDC27-216ENST00000574304 BAZ1BQ9UIG0 1483 aaKnown RBP1.63□□□□□ -2.15
CDC27-216ENST00000574304 JCADQ9P266 1359 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 ZNF608Q9ULD9 1512 aaPredicted RBP1.62□□□□□ -2.15
CDC27-216ENST00000574304 IGKV1OR2-108A0A075B7D4 117 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 TEX46H3BTG2 121 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 OVOL1O14753 267 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 XRCC2O43543 280 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 ENTPD6O75354 484 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 SNX4O95219 450 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 SEC11BP0C7V7 166 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 PRPS1L1P21108 318 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 ADIGQ0VDE8 80 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 TRDNQ13061 729 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 Q6ZS52 159 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 EIF4E3Q8N5X7 224 aaKnown RBP1.62□□□□□ -2.15
CDC27-216ENST00000574304 ITFG1Q8TB96 612 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 ISG20Q96AZ6 181 aaKnown RBP1.62□□□□□ -2.15
CDC27-216ENST00000574304 JSRP1Q96MG2 331 aaPredicted RBP1.62□□□□□ -2.15
CDC27-216ENST00000574304 ZNF75AQ96N20 296 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 REEP1Q9H902 201 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 ELP1O95163 1332 aa1.62□□□□□ -2.15
CDC27-216ENST00000574304 INSRP06213 1382 aa1.61□□□□□ -2.15
CDC27-216ENST00000574304 ZNF73O43830 326 aaPredicted RBP1.61□□□□□ -2.15
CDC27-216ENST00000574304 ERLIN1O75477 346 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms