RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 RNF166Q96A37 237 aaPredicted RBP9.29□□□□□ -0.92
CHD3-216ENST00000573936 RAB39BQ96DA2 213 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 ITPKCQ96DU7 683 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 TECTBQ96PL2 329 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 NR1H4Q96RI1 486 aaPredicted RBP9.29□□□□□ -0.92
CHD3-216ENST00000573936 DUSP21Q9H596 190 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 TRIM36Q9NQ86 728 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 UFSP2Q9NUQ7 469 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 BABAM2Q9NXR7 383 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 RNF7Q9UBF6 113 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 HHLA2Q9UM44 414 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 ERGIC3Q9Y282 383 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 CR1P17927 2039 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 PPIAL4EA0A075B759 164 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 TRBV2A0A0J9YWF9 115 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 IGHV3-64DA0A0J9YX35 117 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 LOC107986453A0A1B0GWG9 222 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 ISPDA4D126 451 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 LRP5LA4QPB2 252 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 OR5B21A6NL26 309 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 OR4C45A6NMZ5 311 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 PTGES3LE9PB15 166 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 PPIAL4DF5H284 164 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 MYL12BO14950 172 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 CD5LO43866 347 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 GATBO75879 557 aaKnown RBP9.28□□□□□ -0.92
CHD3-216ENST00000573936 CYB5R3P00387 301 aaPredicted RBP9.28□□□□□ -0.92
CHD3-216ENST00000573936 IGHV2-70P01814 119 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 CDK1P06493 297 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 PPIAL4FP0DN26 164 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 MDH2P40926 338 aaKnown RBP9.28□□□□□ -0.92
CHD3-216ENST00000573936 PMELP40967 661 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 TAS2R43P59537 309 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 NANOS3P60323 173 aaKnown RBP9.28□□□□□ -0.92
CHD3-216ENST00000573936 GABARAPL2P60520 117 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 SLC35A2P78381 396 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 MPPED2Q15777 294 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 KCNJ8Q15842 424 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 KCTD21Q4G0X4 260 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 FAM76BQ5HYJ3 339 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 RNLSQ5VYX0 342 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 PLCXD3Q63HM9 321 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 TMEM42Q69YG0 159 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 LRRC28Q86X40 367 aaPredicted RBP9.28□□□□□ -0.92
CHD3-216ENST00000573936 RDH10Q8IZV5 341 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 SPICQ8N5J4 248 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 OR5AK2Q8NH90 309 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 PP6455Q8WZ26 134 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 GAL3ST1Q99999 423 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 TLNRD1Q9H1K6 362 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 NEK6Q9HC98 313 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 C1orf123Q9NWV4 160 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 ERVK-18Q9QC07 812 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 BLOC1S6Q9UL45 172 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 PCDHB10Q9UN67 800 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 SLC7A11Q9UPY5 501 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 PPIAL4AQ9Y536 164 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 SVEP1Q4LDE5 3571 aa9.28□□□□□ -0.92
CHD3-216ENST00000573936 hCG_1807616A0A1W2PRN6 198 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 ANKRD61A6NGH8 418 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 ZNF732B4DXR9 585 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 TNFAIP8O95379 198 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 IGHV4-31P0DP07 118 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 ZNF20P17024 532 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 THBS2P35442 1172 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 CFHR2P36980 270 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 GPM6AP51674 278 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 LMO4P61968 165 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 ZNF154Q13106 437 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 CEP78Q5JTW2 689 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 OR2G6Q5TZ20 316 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 ZNF573Q86YE8 665 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 PHC2Q8IXK0 858 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 LINC01356Q8N9X3 169 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 OR13C3Q8NGS6 347 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 OR10Z1Q8NGY1 313 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 ZNF671Q8TAW3 534 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 HPSE2Q8WWQ2 592 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 GATAD2BQ8WXI9 593 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 C1orf159Q96HA4 380 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 NARFLQ9H6Q4 476 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 PPP1R3EQ9H7J1 279 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 ZNF665Q9H7R5 613 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 ZNF696Q9H7X3 374 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 CLEC2DQ9UHP7 191 aa9.27□□□□□ -0.93
CHD3-216ENST00000573936 TRAV38-1A0A0B4J264 116 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 B4DSR2 109 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 E9PI62 339 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 LGALS8O00214 317 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 CDIPTO14735 213 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 OGG1O15527 345 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 RGS10O43665 173 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 NDUFA2O43678 99 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 ZFPL1O95159 310 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 IGHV2-5P01817 119 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 MT-ND2P03891 347 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 EEF1B2P24534 225 aaKnown RBP9.26□□□□□ -0.93
CHD3-216ENST00000573936 C21orf33P30042 268 aaPredicted RBP9.26□□□□□ -0.93
CHD3-216ENST00000573936 FUT6P51993 359 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 WNT4P56705 351 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms