RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	REPIN1	Q9BWE0	567 aa	Known RBP	12.2	□□□□□ -0.46
ABR-223	ENST00000573895	RBM38	Q9H0Z9	239 aa	Known RBP	12.2	□□□□□ -0.46
ABR-223	ENST00000573895	GPR84	Q9NQS5	396 aa		12.2	□□□□□ -0.46
ABR-223	ENST00000573895	DECR2	Q9NUI1	292 aa		12.2	□□□□□ -0.46
ABR-223	ENST00000573895	CDC42EP3	Q9UKI2	254 aa		12.2	□□□□□ -0.46
ABR-223	ENST00000573895	STARD10	Q9Y365	291 aa		12.2	□□□□□ -0.46
ABR-223	ENST00000573895	COL6A5	A8TX70	2615 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	LOC107986453	A0A1B0GWG9	222 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	CCDC160	A6NGH7	325 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	GABRP	O00591	440 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	LMX1B	O60663	402 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	CD55	P08174	381 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	OCM2	P0CE71	109 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	KITLG	P21583	273 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	GPR6	P46095	362 aa	Predicted RBP	12.19	□□□□□ -0.46
ABR-223	ENST00000573895	MAP2K3	P46734	347 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	PSG7	Q13046	419 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	CTF1	Q16619	201 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	ODF4	Q2M2E3	257 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	CHRFAM7A	Q494W8	412 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	TMEM255A	Q5JRV8	349 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	FAM166A	Q6J272	317 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	TMEM91	Q6ZNR0	172 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	SLC16A12	Q6ZSM3	486 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	COMMD2	Q86X83	199 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	YIPF5	Q969M3	257 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	ISOC1	Q96CN7	298 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	HAVCR1	Q96D42	359 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	ELMOD3	Q96FG2	381 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	REEP6	Q96HR9	211 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	SAP30L	Q9HAJ7	183 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	EXOSC4	Q9NPD3	245 aa	Known RBP	12.19	□□□□□ -0.46
ABR-223	ENST00000573895	ZNF275	Q9NSD4	429 aa	Predicted RBP	12.19	□□□□□ -0.46
ABR-223	ENST00000573895	TXNL4B	Q9NX01	149 aa	Known RBP	12.19	□□□□□ -0.46
ABR-223	ENST00000573895	LPAR3	Q9UBY5	353 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	RSL24D1	Q9UHA3	163 aa	Known RBP	12.19	□□□□□ -0.46
ABR-223	ENST00000573895	DHDH	Q9UQ10	334 aa		12.19	□□□□□ -0.46
ABR-223	ENST00000573895	TRBV5-7	A0A0A0MS05	114 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	IGHV1-69-2	A0A0G2JMI3	117 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	LOC100506127	A0A0U1RQW1	187 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	LOC100289279	A0A1B0GTE1	492 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	SLC22A1	O15245	554 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	DHRS3	O75911	302 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	IGHV1-46	P01743	117 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	RAC2	P15153	192 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	ZNF16	P17020	682 aa	Predicted RBP	12.18	□□□□□ -0.46
ABR-223	ENST00000573895	DDOST	P39656	456 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	GLYATL3	Q5SZD4	288 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	ZBTB37	Q5TC79	503 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	FBXW12	Q6X9E4	464 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	PRIMA1	Q86XR5	153 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	SERPINA12	Q8IW75	414 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	OR13C3	Q8NGS6	347 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	OR14K1	Q8NGZ2	314 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	TSEN15	Q8WW01	171 aa	Known RBP	12.18	□□□□□ -0.46
ABR-223	ENST00000573895	RGP1	Q92546	391 aa	Predicted RBP	12.18	□□□□□ -0.46
ABR-223	ENST00000573895	LYZL4	Q96KX0	146 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	KCTD7	Q96MP8	289 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	EGLN1	Q9GZT9	426 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	KCNS2	Q9ULS6	477 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895		V9GYS6	101 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	DYSF	O75923	2080 aa		12.18	□□□□□ -0.46
ABR-223	ENST00000573895	TRAV1-2	A0A0B4J238	106 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	LRP5L	A4QPB2	252 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	ZSCAN5B	A6NJL1	495 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	TIMM8A	O60220	97 aa	Predicted RBP	12.17	□□□□□ -0.46
ABR-223	ENST00000573895	UCHL1	P09936	223 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	SELE	P16581	610 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	FAM3A	P98173	230 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	ZNF92	Q03936	586 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	RIPPLY1	Q0D2K3	151 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	HFE	Q30201	348 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	PGAP1	Q75T13	922 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	MRPL21	Q7Z2W9	205 aa	Known RBP	12.17	□□□□□ -0.46
ABR-223	ENST00000573895	TPRA1	Q86W33	373 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	PARP16	Q8N5Y8	322 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	LINC01356	Q8N9X3	169 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	SEMA6D	Q8NFY4	1073 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	OR5D14	Q8NGL3	314 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	RPL3L	Q92901	407 aa	Known RBP	12.17	□□□□□ -0.46
ABR-223	ENST00000573895	FAM71F1	Q96KD3	344 aa	Predicted RBP	12.17	□□□□□ -0.46
ABR-223	ENST00000573895	DERL3	Q96Q80	235 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	OR14A2	Q96R54	314 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	CENPO	Q9BU64	300 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	NAA50	Q9GZZ1	169 aa	Known RBP	12.17	□□□□□ -0.46
ABR-223	ENST00000573895	SLITRK2	Q9H156	845 aa		12.17	□□□□□ -0.46
ABR-223	ENST00000573895	PURG	Q9UJV8	347 aa	Known RBP	12.17	□□□□□ -0.46
ABR-223	ENST00000573895	hCG_38984	A0A1B0GV85	526 aa		12.16	□□□□□ -0.46
ABR-223	ENST00000573895	C5orf63	A6NC05	138 aa		12.16	□□□□□ -0.46
ABR-223	ENST00000573895	TPD52L2	O43399	206 aa	Known RBP	12.16	□□□□□ -0.46
ABR-223	ENST00000573895	PPIH	O43447	177 aa	Known RBP	12.16	□□□□□ -0.46
ABR-223	ENST00000573895	SPRY3	O43610	288 aa		12.16	□□□□□ -0.46
ABR-223	ENST00000573895	ALX3	O95076	343 aa		12.16	□□□□□ -0.46
ABR-223	ENST00000573895	TGFA	P01135	160 aa		12.16	□□□□□ -0.46
ABR-223	ENST00000573895	FAM157C	P0CG43	387 aa		12.16	□□□□□ -0.46
ABR-223	ENST00000573895	SRM	P19623	302 aa		12.16	□□□□□ -0.46
ABR-223	ENST00000573895	SOX2	P48431	317 aa		12.16	□□□□□ -0.46
ABR-223	ENST00000573895	GSK3A	P49840	483 aa		12.16	□□□□□ -0.46
ABR-223	ENST00000573895	GK2	Q14410	553 aa	Predicted RBP	12.16	□□□□□ -0.46
ABR-223	ENST00000573895	OR8B8	Q15620	311 aa		12.16	□□□□□ -0.46

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