RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 RHBDD2Q6NTF9 364 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 LILRB1Q8NHL6 650 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-206ENST00000573852 EMG1Q92979 244 aaKnown RBP16.75■□□□□ 0.27
SCARF1-206ENST00000573852 CMSS1Q9BQ75 279 aaKnown RBP16.75■□□□□ 0.27
SCARF1-206ENST00000573852 METTL7AQ9H8H3 244 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 LMAN1LQ9HAT1 526 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 C9JQL5 133 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 AGPAT2O15120 278 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 SERPINA2P20848 420 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 MSX1P28360 303 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 ECH1Q13011 328 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 RBM39Q14498 530 aaKnown RBP16.74■□□□□ 0.27
SCARF1-206ENST00000573852 GALNTL5Q7Z4T8 443 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 GLYATL2Q8WU03 294 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 NECAB3Q96P71 396 aaPredicted RBP16.74■□□□□ 0.27
SCARF1-206ENST00000573852 CFAP54Q96N23 3096 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 IGLV3-12A0A075B6K2 115 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 SFTA3P0C7M3 94 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 ZNF43P17038 809 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 ID4P47928 161 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 UBE2V2Q15819 145 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 CHRFAM7AQ494W8 412 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 C2CD4CQ8TF44 421 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 PGAM5Q96HS1 289 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 OXGR1Q96P68 337 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 C12orf57Q99622 126 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 COA4Q9NYJ1 87 aa16.74■□□□□ 0.27
SCARF1-206ENST00000573852 ASCC3Q8N3C0 2202 aaKnown RBP16.74■□□□□ 0.27
SCARF1-206ENST00000573852 FBXO24O75426 580 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 TIAF1O95411 115 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 HEXAP06865 529 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 GLB1P16278 677 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 SLC25A45Q8N413 288 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 CNTNAP3Q9BZ76 1288 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 BIN3Q9NQY0 253 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 ZNF726A6NNF4 738 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 OR2J2O76002 312 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 IFNA2P01563 188 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 FCGR3AP08637 254 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 KCNJ3P48549 501 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 GRB2P62993 217 aaKnown RBP16.73■□□□□ 0.27
SCARF1-206ENST00000573852 IAH1Q2TAA2 248 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-206ENST00000573852 NKAIN1Q4KMZ8 207 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 NSUN5P2Q63ZY6 315 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 BTNL8Q6UX41 500 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 ZNF701Q9NV72 531 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-206ENST00000573852 MCTS1Q9ULC4 181 aaKnown RBP16.73■□□□□ 0.27
SCARF1-206ENST00000573852 PCDHGA1Q9Y5H4 931 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 IGLV3-32A0A0A0MS00 114 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 TAAR5O14804 337 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 ALDH3B1P43353 468 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 SULT1A2P50226 295 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 RSPO4Q2I0M5 234 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-206ENST00000573852 TMEM176BQ3YBM2 270 aaPredicted RBP16.73■□□□□ 0.27
SCARF1-206ENST00000573852 AVPI1Q5T686 147 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 TMEM268Q5VZI3 342 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 ZFP82Q8N141 532 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 OR2M3Q8NG83 312 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 ATPIF1Q9UII2 106 aa16.73■□□□□ 0.27
SCARF1-206ENST00000573852 C14orf166Q9Y224 244 aaKnown RBP16.73■□□□□ 0.27
SCARF1-206ENST00000573852 IGLV3-1P01715 115 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 CD5P06127 495 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 FCGR2AP12318 317 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 FAHP16930 419 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 LBX1P52954 281 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 C6orf201Q7Z4U5 140 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 KMT5CQ86Y97 462 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 DMBX1Q8NFW5 382 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 SHDQ96IW2 340 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 MEMO1Q9Y316 297 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 DHRS7CA6NNS2 312 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 F5H5K5 113 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 RPL12P30050 165 aaKnown RBP16.72■□□□□ 0.27
SCARF1-206ENST00000573852 CD80P33681 288 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 ZNF84P51523 738 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 EIF5AP63241 154 aaKnown RBP16.72■□□□□ 0.27
SCARF1-206ENST00000573852 SURF2Q15527 256 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-206ENST00000573852 EIF5AL1Q6IS14 154 aaKnown RBP16.72■□□□□ 0.27
SCARF1-206ENST00000573852 SEMA6DQ8NFY4 1073 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 CHRDQ9H2X0 955 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 ELL3Q9HB65 397 aaPredicted RBP16.72■□□□□ 0.27
SCARF1-206ENST00000573852 ZNF160Q9HCG1 818 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 C1orf123Q9NWV4 160 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 MYOTQ9UBF9 498 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 GHRLQ9UBU3 117 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 B3GALT1Q9Y5Z6 326 aa16.72■□□□□ 0.27
SCARF1-206ENST00000573852 SERPINE3A8MV23 424 aa16.71■□□□□ 0.27
SCARF1-206ENST00000573852 RBMXP38159 391 aaKnown RBP16.71■□□□□ 0.27
SCARF1-206ENST00000573852 CLDN17P56750 224 aa16.71■□□□□ 0.27
SCARF1-206ENST00000573852 HDHD3Q9BSH5 251 aaPredicted RBP16.71■□□□□ 0.27
SCARF1-206ENST00000573852 CST4P01036 141 aa16.71■□□□□ 0.26
SCARF1-206ENST00000573852 WDR74Q6RFH5 385 aaPredicted RBP16.71■□□□□ 0.26
SCARF1-206ENST00000573852 OR5L2Q8NGL0 311 aa16.71■□□□□ 0.26
SCARF1-206ENST00000573852 PIGTQ969N2 578 aa16.71■□□□□ 0.26
SCARF1-206ENST00000573852 ZNF2Q9BSG1 426 aaPredicted RBP16.71■□□□□ 0.26
SCARF1-206ENST00000573852 TM2D1Q9BX74 207 aa16.71■□□□□ 0.26
SCARF1-206ENST00000573852 FBXL17Q9UF56 701 aa16.71■□□□□ 0.26
SCARF1-206ENST00000573852 OR5H15A6NDH6 313 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 AQP7P3A6NL99 342 aa16.7■□□□□ 0.26
SCARF1-206ENST00000573852 COLCA2A8K830 154 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms