RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 PRKYO43930 277 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 FSHBP01225 129 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 LHBP01229 141 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 PSMB10P40306 273 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 PITPNBP48739 271 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 HILS1P60008 231 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 EFNB1P98172 346 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 PAX2Q02962 417 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 OR8B8Q15620 311 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 SNCBQ16143 134 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 ARMCX4Q5H9R4 360 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 WDR25Q64LD2 544 aaPredicted RBP6.19□□□□□ -1.42
NUP88-205ENST00000572809 KDM4DQ6B0I6 523 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 KCTD18Q6PI47 426 aaPredicted RBP6.19□□□□□ -1.42
NUP88-205ENST00000572809 DEGS2Q6QHC5 323 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 ZNF841Q6ZN19 808 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 MEPCEQ7L2J0 689 aaKnown RBP6.19□□□□□ -1.42
NUP88-205ENST00000572809 AMIGO2Q86SJ2 522 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 C11orf53Q8IXP5 236 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 GCSAMQ8N6F7 178 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 CSNK2A3Q8NEV1 391 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 LRTOMTQ8WZ04 291 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 NUDT16L1Q9BRJ7 211 aaKnown RBP6.19□□□□□ -1.42
NUP88-205ENST00000572809 MROQ9BYG7 248 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 PRRG3Q9BZD7 231 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 PPP1R3EQ9H7J1 279 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 RNPEPL1Q9HAU8 725 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 TRIM36Q9NQ86 728 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 KRT84Q9NSB2 600 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 ERVK-18Q9QC07 812 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 KLHDC2Q9Y2U9 406 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 RHBDD3Q9Y3P4 386 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 WNK2Q9Y3S1 2297 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 IGHV2-70DA0A0C4DH43 119 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 TMEM269A0A1B0GVZ9 245 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 hCG_1807616A0A1W2PRN6 198 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 CCDC182A6NF36 153 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 OOEPA6NGQ2 149 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 A6NLC8 198 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 ANXA2P2A6NMY6 339 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 ZNF850A8MQ14 1090 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 PSMD9O00233 223 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 ADAM20O43506 726 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 MITFO75030 526 aaPredicted RBP6.18□□□□□ -1.42
NUP88-205ENST00000572809 ZNF254O75437 659 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 CIB2O75838 187 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 LPLP06858 475 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 LIPFP07098 398 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 MRPL3P09001 348 aaKnown RBP6.18□□□□□ -1.42
NUP88-205ENST00000572809 PPIAL4GP0DN37 164 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 FCGR1AP12314 374 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 DCTDP32321 178 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 NPY4RP50391 375 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 LGALS4P56470 323 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 SRSF3P84103 164 aaKnown RBP6.18□□□□□ -1.42
NUP88-205ENST00000572809 HOXA4Q00056 320 aaPredicted RBP6.18□□□□□ -1.42
NUP88-205ENST00000572809 IL5RAQ01344 420 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 KLF17Q5JT82 389 aaPredicted RBP6.18□□□□□ -1.42
NUP88-205ENST00000572809 LCN1P1Q5VSP4 162 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 SLX4IPQ5VYV7 408 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 RBMS3Q6XE24 437 aaKnown RBP6.18□□□□□ -1.42
NUP88-205ENST00000572809 BCDIN3DQ7Z5W3 292 aaKnown RBP6.18□□□□□ -1.42
NUP88-205ENST00000572809 WDR86Q86TI4 376 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 GALNT4Q8N4A0 578 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 FTMTQ8N4E7 242 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.18□□□□□ -1.42
NUP88-205ENST00000572809 TCEANCQ8N8B7 351 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 SEMA6DQ8NFY4 1073 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 OR1M1Q8NGA1 313 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 OR8B12Q8NGG6 310 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 FAM216AQ8WUB2 273 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 ASB17Q8WXJ9 295 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 PIGCQ92535 297 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 LYZL4Q96KX0 146 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 C20orf173Q96LM9 149 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 HIST1H2AAQ96QV6 131 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 SLC6A7Q99884 636 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 MICU1Q9BPX6 476 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 MS4A7Q9GZW8 240 aaPredicted RBP6.18□□□□□ -1.42
NUP88-205ENST00000572809 SEMA6AQ9H2E6 1030 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 ZNF69Q9UC07 566 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 ENOPH1Q9UHY7 261 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 ZNF391Q9UJN7 358 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 LRP12Q9Y561 859 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 MPC1Q9Y5U8 109 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 TMEM14AQ9Y6G1 99 aa6.18□□□□□ -1.42
NUP88-205ENST00000572809 A0A0U1RQV5 110 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 ZAR1LA6NP61 321 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 CDIPTO14735 213 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 PHYHO14832 338 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 ENSAO43768 121 aaKnown RBP6.17□□□□□ -1.42
NUP88-205ENST00000572809 MPIG6BO95866 241 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 CST4P01036 141 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 GYPAP02724 150 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 HOXA5P20719 270 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 ACKR3P25106 362 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 EPHA2P29317 976 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 CFHR2P36980 270 aa6.17□□□□□ -1.42
NUP88-205ENST00000572809 RIDAP52758 137 aaKnown RBP6.17□□□□□ -1.42
NUP88-205ENST00000572809 ACTR3P61158 418 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms