RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 DHRS7CA6NNS2 312 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 EGR1P18146 543 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 MDH2P40926 338 aaKnown RBP13.26□□□□□ -0.29
CHD3-215ENST00000572750 CCR9P51686 369 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 GTF2A1P52655 376 aaPredicted RBP13.26□□□□□ -0.29
CHD3-215ENST00000572750 GBX2P52951 348 aaPredicted RBP13.26□□□□□ -0.29
CHD3-215ENST00000572750 CDH15P55291 814 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 CLVS2Q5SYC1 327 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 TMEM42Q69YG0 159 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 XAF1Q6GPH4 301 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 MOB3CQ70IA8 216 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 C11orf53Q8IXP5 236 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 C1orf87Q8N0U7 546 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 KLHL36Q8N4N3 616 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 OR51A4Q8NGJ6 313 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 RPL3LQ92901 407 aaKnown RBP13.26□□□□□ -0.29
CHD3-215ENST00000572750 RAB39BQ96DA2 213 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 RNF170Q96K19 258 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 TLNRD1Q9H1K6 362 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 YAE1D1Q9NRH1 226 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 PLCXD1Q9NUJ7 323 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 RNF7Q9UBF6 113 aa13.26□□□□□ -0.29
CHD3-215ENST00000572750 CAB39Q9Y376 341 aaPredicted RBP13.26□□□□□ -0.29
CHD3-215ENST00000572750 ANKRD61A6NGH8 418 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 TMEM210A6NLX4 147 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 NRASP01111 189 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 ISG15P05161 165 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 C21orf33P30042 268 aaPredicted RBP13.25□□□□□ -0.29
CHD3-215ENST00000572750 MRPL28Q13084 256 aaKnown RBP13.25□□□□□ -0.29
CHD3-215ENST00000572750 CEACAM21Q3KPI0 293 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 TMEM155Q4W5P6 130 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 C6orf141Q5SZD1 244 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 TMEM244Q5VVB8 128 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 SFRP4Q6FHJ7 346 aaPredicted RBP13.25□□□□□ -0.29
CHD3-215ENST00000572750 WDR82Q6UXN9 313 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 TMPRSS11AQ6ZMR5 421 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 KRT74Q7RTS7 529 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 LRRC28Q86X40 367 aaPredicted RBP13.25□□□□□ -0.29
CHD3-215ENST00000572750 STX19Q8N4C7 294 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 SPICQ8N5J4 248 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 ZNF676Q8N7Q3 588 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 LINC01356Q8N9X3 169 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 NPRL2Q8WTW4 380 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 LRRC29Q8WV35 223 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 SGCDQ92629 289 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 ITFG2Q969R8 447 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 CNBD2Q96M20 576 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 HIST1H2AAQ96QV6 131 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 PDCD1LG2Q9BQ51 273 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 FKBP14Q9NWM8 211 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 PAK1IP1Q9NWT1 392 aaPredicted RBP13.25□□□□□ -0.29
CHD3-215ENST00000572750 PCDHGB5Q9Y5G0 923 aa13.25□□□□□ -0.29
CHD3-215ENST00000572750 PPIAL4EA0A075B759 164 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 OR5B21A6NL26 309 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 CEACAM18A8MTB9 384 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 ZNF732B4DXR9 585 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 PPIAL4DF5H284 164 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 C3orf80F5H4A9 247 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 CDIPTO14735 213 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 ZFPL1O95159 310 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 LALBAP00709 142 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 TGFAP01135 160 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 PPIAL4FP0DN26 164 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 TGM4P49221 684 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 SEC61A1P61619 476 aaKnown RBP13.24□□□□□ -0.29
CHD3-215ENST00000572750 GNG3P63215 75 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 MED21Q13503 144 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 ZNF404Q494X3 552 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 FAM166AQ6J272 317 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 MUC20Q8N307 709 aaPredicted RBP13.24□□□□□ -0.29
CHD3-215ENST00000572750 GCSAMQ8N6F7 178 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 SCCPDHQ8NBX0 429 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 DEFB108BQ8NET1 73 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 OR13C3Q8NGS6 347 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 OR52N1Q8NH53 320 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 TRMT10AQ8TBZ6 339 aaKnown RBP13.24□□□□□ -0.29
CHD3-215ENST00000572750 GATAD2BQ8WXI9 593 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 ADAT3Q96EY9 351 aaPredicted RBP13.24□□□□□ -0.29
CHD3-215ENST00000572750 C1orf159Q96HA4 380 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 CHST5Q9GZS9 411 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 CHCHD3Q9NX63 227 aaKnown RBP13.24□□□□□ -0.29
CHD3-215ENST00000572750 ERVK-18Q9QC07 812 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 HHLA2Q9UM44 414 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 PCDHB10Q9UN67 800 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 PPIAL4AQ9Y536 164 aa13.24□□□□□ -0.29
CHD3-215ENST00000572750 IGHV3OR15-7A0A075B7D8 119 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 TRBV2A0A0J9YWF9 115 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 TMEM212A6NML5 194 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 A8MV72 311 aaPredicted RBP13.23□□□□□ -0.29
CHD3-215ENST00000572750 MYL12BO14950 172 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 MSMBP08118 114 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 CCDC159P0C7I6 412 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 RPS2P15880 293 aaKnown RBP13.23□□□□□ -0.29
CHD3-215ENST00000572750 GMFBP60983 142 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 DOC2BQ14184 412 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 CDK5R1Q15078 307 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 EGFL6Q8IUX8 553 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 ZFP41Q8N8Y5 198 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 OR5A2Q8NGI9 324 aa13.23□□□□□ -0.29
CHD3-215ENST00000572750 OR5AK2Q8NH90 309 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms