RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 USP43Q70EL4 1123 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 OR5A2Q8NGI9 324 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 STMN2Q93045 179 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 RNFT2Q96EX2 444 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 SLC6A7Q99884 636 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 SUCNR1Q9BXA5 334 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 KAAG1Q9UBP8 84 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 NUP50Q9UKX7 468 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 SLC22A13Q9Y226 551 aa16.75■□□□□ 0.27
NUP88-204ENST00000572290 A0A1B0GTI1 187 aa16.74■□□□□ 0.27
NUP88-204ENST00000572290 C22orf46C9J442 243 aa16.74■□□□□ 0.27
NUP88-204ENST00000572290 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.74■□□□□ 0.27
NUP88-204ENST00000572290 TMPRSS2O15393 492 aa16.74■□□□□ 0.27
NUP88-204ENST00000572290 ENSAO43768 121 aaKnown RBP16.74■□□□□ 0.27
NUP88-204ENST00000572290 PPIAL4GP0DN37 164 aa16.74■□□□□ 0.27
NUP88-204ENST00000572290 ZNF85Q03923 595 aa16.74■□□□□ 0.27
NUP88-204ENST00000572290 PLCXD3Q63HM9 321 aa16.74■□□□□ 0.27
NUP88-204ENST00000572290 DOK3Q7L591 496 aa16.74■□□□□ 0.27
NUP88-204ENST00000572290 C22orf15Q8WYQ4 148 aa16.74■□□□□ 0.27
NUP88-204ENST00000572290 C12orf43Q96C57 262 aaKnown RBP16.74■□□□□ 0.27
NUP88-204ENST00000572290 SEH1LQ96EE3 360 aa16.74■□□□□ 0.27
NUP88-204ENST00000572290 RASSF4Q9H2L5 321 aa16.74■□□□□ 0.27
NUP88-204ENST00000572290 OR51I2Q9H344 312 aa16.74■□□□□ 0.27
NUP88-204ENST00000572290 SMURF1Q9HCE7 757 aa16.74■□□□□ 0.27
NUP88-204ENST00000572290 V9GYS6 101 aa16.74■□□□□ 0.27
NUP88-204ENST00000572290 OR5B21A6NL26 309 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 SNTNA6NMZ2 147 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 NRASP01111 189 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 HILS1P60008 231 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 GMFBP60983 142 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 ACTC1P68032 377 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 ACTA1P68133 377 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 DMRTC1Q5HYR2 192 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 WDR38Q5JTN6 314 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 FAM220AQ7Z4H9 259 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 CATSPERDQ86XM0 798 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 OR14K1Q8NGZ2 314 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 RORBQ92753 470 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 UPRTQ96BW1 309 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 JMJD8Q96S16 334 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 CCL13Q99616 98 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 DNAJB11Q9UBS4 358 aa16.73■□□□□ 0.27
NUP88-204ENST00000572290 MXRA5Q9NR99 2828 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 DVL1O14640 695 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 AKR7A2O43488 359 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 CCL1P22362 96 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 ELF3P78545 371 aaPredicted RBP16.72■□□□□ 0.27
NUP88-204ENST00000572290 ODF4Q2M2E3 257 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 TP53I3Q53FA7 332 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 CLVS2Q5SYC1 327 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 Q6ZSR3 168 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 SLC36A1Q7Z2H8 476 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 ENTHD1Q8IYW4 607 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 WDR13Q9H1Z4 485 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 GPR173Q9NS66 373 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 ZNF69Q9UC07 566 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 AASSQ9UDR5 926 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 GNG8Q9UK08 70 aa16.72■□□□□ 0.27
NUP88-204ENST00000572290 LOC100130705A0A1B0GUX0 176 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 A0A1B0GVI7 797 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 DAPL1A0PJW8 107 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 DHRS7CA6NNS2 312 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 DLGAP1O14490 977 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 MPZL2O60487 215 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 LIPFP07098 398 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 GABRB1P18505 474 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 FGF12P61328 243 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 ISL1P61371 349 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 ZSCAN26Q16670 478 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 C11orf91Q3C1V1 193 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 TMEM42Q69YG0 159 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 STUMQ69YW2 141 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 OR5T2Q8NGG2 359 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 ZNF671Q8TAW3 534 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 ZFAND2BQ8WV99 257 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 ST8SIA4Q92187 359 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 SNTG1Q9NSN8 517 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 ACOXLQ9NUZ1 547 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 FAM118AQ9NWS6 357 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 PCDHGB1Q9Y5G3 927 aa16.71■□□□□ 0.27
NUP88-204ENST00000572290 COL6A5A8TX70 2615 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 A0A1B0GW55 424 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 J3QRE1 110 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 SYT7O43581 403 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 FCN3O75636 299 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 RHBDL1O75783 438 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 ECDO95905 644 aaPredicted RBP16.7■□□□□ 0.26
NUP88-204ENST00000572290 DUX4L2P0CJ85 424 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 DUX4L3P0CJ86 424 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 DUX4L4P0CJ87 422 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 DUX4L5P0CJ88 424 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 DUX4L6P0CJ89 424 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 DUX4L7P0CJ90 424 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 IGHV4-38-2P0DP08 117 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 GLRA1P23415 457 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 ATPAF1Q5TC12 328 aaPredicted RBP16.7■□□□□ 0.26
NUP88-204ENST00000572290 HAGHLQ6PII5 290 aaPredicted RBP16.7■□□□□ 0.26
NUP88-204ENST00000572290 DUX4L9Q6RFH8 374 aaPredicted RBP16.7■□□□□ 0.26
NUP88-204ENST00000572290 BTN2A1Q7KYR7 527 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 KCTD20Q7Z5Y7 419 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms