RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 P2RY10O00398 339 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 PLPP2O43688 288 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 ISG15P05161 165 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 FAHP16930 419 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 ZNF19P17023 458 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 HOXB4P17483 251 aaPredicted RBP11.7□□□□□ -0.54
RPAIN-211ENST00000572174 GBX2P52951 348 aaPredicted RBP11.7□□□□□ -0.54
RPAIN-211ENST00000572174 GNB2P62879 340 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 ADARB1P78563 741 aaKnown RBP11.7□□□□□ -0.54
RPAIN-211ENST00000572174 WDR38Q5JTN6 314 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 ZNF573Q86YE8 665 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 OR2G2Q8NGZ5 317 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 LRRC29Q8WV35 223 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 APH1BQ8WW43 257 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 C4orf36Q96KX1 117 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 TMEM246Q9BRR3 403 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 LPAR2Q9HBW0 351 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 TMEM165Q9HC07 324 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 FGF20Q9NP95 211 aaPredicted RBP11.7□□□□□ -0.54
RPAIN-211ENST00000572174 ERVK13-1Q9NX77 482 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 DCAF16Q9NXF7 216 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 SLC7A11Q9UPY5 501 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 POLDIP2Q9Y2S7 368 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 EXOSC1Q9Y3B2 195 aaKnown RBP11.7□□□□□ -0.54
RPAIN-211ENST00000572174 ARHGAP32A7KAX9 2087 aa11.7□□□□□ -0.54
RPAIN-211ENST00000572174 LOC107986453A0A1B0GWG9 222 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 EFCAB10A6NFE3 127 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 ANKRD61A6NGH8 418 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 TMEM212A6NML5 194 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 MAGEB4O15481 346 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-211ENST00000572174 WBP4O75554 376 aaKnown RBP11.69□□□□□ -0.54
RPAIN-211ENST00000572174 PIPP12273 146 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-211ENST00000572174 SRP14P37108 136 aaKnown RBP11.69□□□□□ -0.54
RPAIN-211ENST00000572174 PMELP40967 661 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 PITPNBP48739 271 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 GPM6AP51674 278 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 OR12D2P58182 307 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 CSNK2BP67870 215 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 CNN3Q15417 329 aaKnown RBP11.69□□□□□ -0.54
RPAIN-211ENST00000572174 TMEM42Q69YG0 159 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 BTNL3Q6UXE8 466 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 WDR82Q6UXN9 313 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 MOB3CQ70IA8 216 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 SLC36A1Q7Z2H8 476 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 OR52I1Q8NGK6 324 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 HPSE2Q8WWQ2 592 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 DNTTIP1Q9H147 329 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 AMBNQ9NP70 447 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 CNOT2Q9NZN8 540 aaKnown RBP11.69□□□□□ -0.54
RPAIN-211ENST00000572174 ERVK-18Q9QC07 812 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 DNAJB11Q9UBS4 358 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 CLN8Q9UBY8 286 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 HHLA2Q9UM44 414 aa11.69□□□□□ -0.54
RPAIN-211ENST00000572174 DIMT1Q9UNQ2 313 aaKnown RBP11.69□□□□□ -0.54
RPAIN-211ENST00000572174 CAB39Q9Y376 341 aaPredicted RBP11.69□□□□□ -0.54
RPAIN-211ENST00000572174 NKX6-3A6NJ46 265 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 SRRM5B3KS81 715 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 ZNF732B4DXR9 585 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 LHBP01229 141 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 WNT2P09544 360 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 ZNF20P17024 532 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 THBS2P35442 1172 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 TGM4P49221 684 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 ALKBH1Q13686 389 aaKnown RBP11.68□□□□□ -0.54
RPAIN-211ENST00000572174 CCDC58Q4VC31 144 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 CEP78Q5JTW2 689 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 TEX36Q5VZQ5 186 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 CD276Q5ZPR3 534 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 LHFPL3Q86UP9 236 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 GCSAMQ8N6F7 178 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 ZNF676Q8N7Q3 588 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 BOLLQ8N9W6 283 aaKnown RBP11.68□□□□□ -0.54
RPAIN-211ENST00000572174 SCCPDHQ8NBX0 429 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 OR14K1Q8NGZ2 314 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 CNIH3Q8TBE1 160 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 PELI1Q96FA3 418 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 MRI1Q9BV20 369 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 CHST5Q9GZS9 411 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 AASSQ9UDR5 926 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 MYRFQ9Y2G1 1151 aa11.68□□□□□ -0.54
RPAIN-211ENST00000572174 A0A1B0GTI1 187 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 C3orf80F5H4A9 247 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 J3QT63 122 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 CDIPTO14735 213 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 GPR37O15354 613 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 CLIC3O95833 236 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 OCM2P0CE71 109 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 OCMP0CE72 109 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-211ENST00000572174 PSMB10P40306 273 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 LCN2P80188 198 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 RIPK1Q13546 671 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 ODF4Q2M2E3 257 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 SMIM21Q3B7S5 101 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 FAHD2BQ6P2I3 314 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-211ENST00000572174 ZNF771Q7L3S4 317 aaPredicted RBP11.67□□□□□ -0.54
RPAIN-211ENST00000572174 WDR86Q86TI4 376 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 PRSS35Q8N3Z0 413 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 OR5AK2Q8NH90 309 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 TFAP2CQ92754 450 aa11.67□□□□□ -0.54
RPAIN-211ENST00000572174 CPNE2Q96FN4 548 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms