RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 NUP210LQ5VU65 1888 aa2.94□□□□□ -1.94
CDC27-213ENST00000571643 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
CDC27-213ENST00000571643 SPTBP11277 2137 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 ITPR1Q14643 2758 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 COL6A6A6NMZ7 2263 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 IGLV9-49A0A0B4J1Y8 123 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 GNG14A0A1W2PPG7 69 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 LRP5LA4QPB2 252 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 LRIT2A6NDA9 550 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 IDSB3KWA1 339 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 TRIM49D1C9J1S8 452 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 TMEM238C9JI98 176 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 H0YL77 283 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 CCSO14618 274 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 TAPBPO15533 448 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 GALR3O60755 368 aaPredicted RBP2.93□□□□□ -1.94
CDC27-213ENST00000571643 DPM1O60762 260 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 SLC19A2O60779 497 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 RAMP3O60896 148 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 KRT33AO76009 404 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 IFNW1P05000 195 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 GNAO1P09471 354 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 RD3LP0DJH9 198 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 RNH1P13489 461 aaKnown RBP2.93□□□□□ -1.94
CDC27-213ENST00000571643 GFAPP14136 432 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 H2AFXP16104 143 aaPredicted RBP2.93□□□□□ -1.94
CDC27-213ENST00000571643 CBR1P16152 277 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 ZNF43P17038 809 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 F8A1P23610 371 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 DCKP27707 260 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 PSMB5P28074 263 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 SERPINB5P36952 375 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 ID1P41134 155 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 DNASE1L1P49184 302 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 CDK9P50750 372 aaKnown RBP2.93□□□□□ -1.94
CDC27-213ENST00000571643 NKX2-5P52952 324 aaPredicted RBP2.93□□□□□ -1.94
CDC27-213ENST00000571643 SLC18A1P54219 525 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 PKNOX1P55347 436 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 TMEM50BP56557 158 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 CLDN17P56750 224 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 SPCS3P61009 180 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 PSPHP78330 225 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 EWSR1Q01844 656 aaKnown RBP eCLIP2.93□□□□□ -1.94
CDC27-213ENST00000571643 PAX2Q02962 417 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 MFGE8Q08431 387 aaPredicted RBP2.93□□□□□ -1.94
CDC27-213ENST00000571643 GPR50Q13585 617 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 CEACAM7Q14002 265 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 ATXN7L3Q14CW9 347 aaPredicted RBP2.93□□□□□ -1.94
CDC27-213ENST00000571643 PSG5Q15238 335 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 ZNHIT3Q15649 155 aaPredicted RBP2.93□□□□□ -1.94
CDC27-213ENST00000571643 LINC00303Q3SY05 128 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 DCAF10Q5QP82 559 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 IDNKQ5T6J7 187 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 C1orf189Q5VU69 101 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 SPINK14Q6IE38 97 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 OR5M10Q6IEU7 315 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 FRMPD2BQ6IN97 320 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 ANKRD26P1Q6NSI1 321 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 SLC27A4Q6P1M0 643 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 TRIM40Q6P9F5 258 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 TMEM205Q6UW68 189 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 IGFL2Q6UWQ7 119 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 RNF165Q6ZSG1 346 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 Q6ZSR9 355 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 ZNF621Q6ZSS3 439 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 SSX6Q7RTT6 188 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 VN1R4Q7Z5H5 301 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 CYP4Z2PQ8N1L4 340 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 METTL4Q8N3J2 472 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 C2orf73Q8N5S3 287 aaPredicted RBP2.93□□□□□ -1.94
CDC27-213ENST00000571643 CDRT4Q8N9R6 151 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 ZNF383Q8NA42 475 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 TMEM178AQ8NBL3 297 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 NPEPL1Q8NDH3 523 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 OR2D3Q8NGH3 330 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 OR5AK3PQ8NH89 298 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 AENQ8WTP8 325 aaKnown RBP2.93□□□□□ -1.94
CDC27-213ENST00000571643 ISOC2Q96AB3 205 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 L3HYPDHQ96EM0 354 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 C10orf90Q96M02 699 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 WFIKKN1Q96NZ8 548 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 TNFRSF13CQ96RJ3 184 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 SERPINI1Q99574 410 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 UTP23Q9BRU9 249 aaKnown RBP2.93□□□□□ -1.94
CDC27-213ENST00000571643 CABLES2Q9BTV7 478 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 TRIM4Q9C037 500 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 ING2Q9H160 280 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 ALG9Q9H6U8 611 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 C12orf4Q9NQ89 552 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 INPP5EQ9NRR6 644 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 C1orf109Q9NX04 203 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 KLRF1Q9NZS2 232 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 CCDC59Q9P031 241 aaKnown RBP2.93□□□□□ -1.94
CDC27-213ENST00000571643 TMEM181Q9P2C4 612 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 DHCR7Q9UBM7 475 aaKnown RBP2.93□□□□□ -1.94
CDC27-213ENST00000571643 EIF3KQ9UBQ5 218 aaKnown RBP2.93□□□□□ -1.94
CDC27-213ENST00000571643 GHRLQ9UBU3 117 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 LGALS13Q9UHV8 139 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 SLC6A5Q9Y345 797 aa2.93□□□□□ -1.94
CDC27-213ENST00000571643 SPIN1Q9Y657 262 aaPredicted RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms