RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 C2orf50Q96LR7 162 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 ULBP2Q9BZM5 246 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 FN3KRPQ9HA64 309 aa13.52□□□□□ -0.25
USP43-202ENST00000570475 SHANK1Q9Y566 2161 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 DIDO1Q9BTC0 2240 aaKnown RBP13.51□□□□□ -0.25
USP43-202ENST00000570475 CEP250Q9BV73 2442 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 A0A0A6YYD4 124 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 SGCEO43556 437 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 NPIPB7O75200 414 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 PIAS2O75928 621 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 SCGNO76038 276 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 IFNA2P01563 188 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 PTGFRP43088 359 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 CFHR1Q03591 330 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 SLC16A13Q7RTY0 426 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 NOXO1Q8NFA2 376 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 UCN2Q96RP3 112 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 GPHA2Q96T91 129 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 RNF126Q9BV68 326 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 PTPRSQ13332 1948 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 DNAJC13O75165 2243 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 ZNF98A6NK75 572 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 CALCRP30988 508 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 GABRA4P48169 554 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 RAB5BP61020 215 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 ZNF345Q14585 488 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 LINC00518Q8N0U6 118 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 FAM131CQ96AQ9 280 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 CHRDQ9H2X0 955 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 OR51B6Q9H340 312 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 FBXL17Q9UF56 701 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 CELSR3Q9NYQ7 3312 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 LTBP2Q14767 1821 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 IGKV3D-11A0A0A0MRZ8 115 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 FTCDNL1E5RQL4 147 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 OR7C1O76099 320 aaPredicted RBP13.51□□□□□ -0.25
USP43-202ENST00000570475 FHITP49789 147 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 GPR85P60893 370 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 HOGA1Q86XE5 327 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 RXFP4Q8TDU9 374 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 PIGCQ92535 297 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 MRPL24Q96A35 216 aaKnown RBP13.51□□□□□ -0.25
USP43-202ENST00000570475 MVB12AQ96EY5 273 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 UQCC2Q9BRT2 126 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 RSRP1Q9BUV0 290 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 SPACA1Q9HBV2 294 aa13.51□□□□□ -0.25
USP43-202ENST00000570475 A0A1W2PQD3 144 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 C1orf196B1AJZ1 125 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 BCAT2O15382 392 aaPredicted RBP13.5□□□□□ -0.25
USP43-202ENST00000570475 OR5H8P0DN80 308 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 NAT2P11245 290 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 LPAR6P43657 344 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 RAB13P51153 203 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 PIGPP57054 158 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 TAS2R46P59540 309 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 ANKRD37Q7Z713 158 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 TMEM217Q8N7C4 229 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 FAM213BQ8TBF2 198 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 MRGPRFQ96AM1 343 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 ZFP57Q9NU63 452 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 EFNA2O43921 213 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 RIPPLY1Q0D2K3 151 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 IKZF1Q13422 519 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 DOK3Q7L591 496 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 SLC22A8Q8TCC7 542 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 PHYHIPLQ96FC7 376 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 MAGT1Q9H0U3 335 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 PADI1Q9ULC6 663 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 ARG1P05089 322 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 GSTP1P09211 210 aaKnown RBP13.5□□□□□ -0.25
USP43-202ENST00000570475 ADCYAP1P18509 176 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 CBX5P45973 191 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 TMEM33P57088 247 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 HERV-K104P61576 105 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 PRSS54Q6PEW0 395 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 DEGS2Q6QHC5 323 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 AKR7LQ8NHP1 331 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 BORCS8Q96FH0 119 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 C1orf123Q9NWV4 160 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 LPAR3Q9UBY5 353 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 GPR132Q9UNW8 380 aa13.5□□□□□ -0.25
USP43-202ENST00000570475 DCDP81605 110 aaKnown RBP13.49□□□□□ -0.25
USP43-202ENST00000570475 SMAD4Q13485 552 aaKnown RBP13.49□□□□□ -0.25
USP43-202ENST00000570475 C5orf46Q6UWT4 87 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 ARRDC1Q8N5I2 433 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 OR8U1Q8NH10 309 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 NDRG3Q9UGV2 375 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 URGCP-MRPS24S4R325 110 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 M0R135 149 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 PHF1O43189 567 aaPredicted RBP13.49□□□□□ -0.25
USP43-202ENST00000570475 ISG15P05161 165 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 LTBRP36941 435 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 RGS19P49795 217 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 SRYQ05066 204 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 FBXW12Q6X9E4 464 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 MISPQ8IVT2 679 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 ZNF799Q96GE5 643 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 ZNF385AQ96PM9 386 aaKnown RBP13.49□□□□□ -0.25
USP43-202ENST00000570475 FAM117AQ9C073 453 aa13.49□□□□□ -0.25
USP43-202ENST00000570475 WIF1Q9Y5W5 379 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms