RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SOX21Q9Y651 276 aaPredicted RBP14.1□□□□□ -0.15
MAP1LC3B-208ENST00000570189 IGHV1-69DA0A0B4J2H0 117 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 A0A1B0GVI7 797 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 OR5B21A6NL26 309 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 DHRS7CA6NNS2 312 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 IGHV1-69P01742 117 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 RIDAP52758 137 aaKnown RBP14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 HCCSP53701 268 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 CAV3P56539 151 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 ACTR3P61158 418 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 C1orf122Q6ZSJ8 110 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 ZDHHC13Q8IUH4 622 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 GID4Q8IVV7 300 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 FAM216BQ8N7L0 139 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 FAM81AQ8TBF8 368 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 NPRL2Q8WTW4 380 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 ST8SIA4Q92187 359 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 RPL3LQ92901 407 aaKnown RBP14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 MED30Q96HR3 178 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 HIST1H2AAQ96QV6 131 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 DCTN5Q9BTE1 182 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 OSBPL10Q9BXB5 764 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 SLITRK2Q9H156 845 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 ADGRL4Q9HBW9 690 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 ACOXLQ9NUZ1 547 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 AP4S1Q9Y587 144 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 PKD1L1Q8TDX9 2849 aa14.09□□□□□ -0.15
MAP1LC3B-208ENST00000570189 A0A1B0GUS0 222 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 MDFIC2A0A1B0GVS7 189 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 A0A1B0GW55 424 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 HOXA3O43365 443 aaPredicted RBP14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 NDUFB3O43676 98 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 MTRF1O75570 445 aaKnown RBP14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 DHRS3O75911 302 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 MRPL3P09001 348 aaKnown RBP14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 DUX4L2P0CJ85 424 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 DUX4L3P0CJ86 424 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 DUX4L4P0CJ87 422 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 DUX4L5P0CJ88 424 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 DUX4L6P0CJ89 424 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 DUX4L7P0CJ90 424 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 EPHA2P29317 976 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 ARF6P62330 175 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 EGR3Q06889 387 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 RIPPLY1Q0D2K3 151 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 LRRC10Q5BKY1 277 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 PRR31Q5SQ13 230 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 TMEM42Q69YG0 159 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 DUX4L9Q6RFH8 374 aaPredicted RBP14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 ZNF322Q6U7Q0 402 aaPredicted RBP14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 LDLRAD3Q86YD5 345 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 WDR13Q9H1Z4 485 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 ZNF696Q9H7X3 374 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 UNKLQ9H9P5 680 aaKnown RBP14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 GPR84Q9NQS5 396 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 CLN6Q9NWW5 311 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 DUX4Q9UBX2 424 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 PCDHGB1Q9Y5G3 927 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 TRRAPQ9Y4A5 3859 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 MGAM2Q2M2H8 2515 aa14.08□□□□□ -0.16
MAP1LC3B-208ENST00000570189 NKX6-3A6NJ46 265 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 SIGLEC5O15389 551 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 MITFO75030 526 aaPredicted RBP14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 TTRP02766 147 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 MELTFP08582 738 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 ACAA1P09110 424 aaPredicted RBP14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 GPM6AP51674 278 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 CXCR4P61073 352 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 POU4F2Q12837 409 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 RUSC1-AS1Q66K80 236 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 ELMOD2Q8IZ81 293 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 CMTM4Q8IZR5 234 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 TCEANCQ8N8B7 351 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 OR51E1Q8TCB6 317 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 SSMEM1Q8WWF3 244 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 ZDHHC16Q969W1 377 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 SEH1LQ96EE3 360 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 GAFA1Q96PS6 74 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 GABARAPL3Q9BY60 117 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 RASL12Q9NYN1 266 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 H2AFY2Q9P0M6 372 aaPredicted RBP14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 NLKQ9UBE8 527 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 DNAJB11Q9UBS4 358 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 WARS2Q9UGM6 360 aaKnown RBP14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 ENPP5Q9UJA9 477 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 ZNF222Q9UK12 451 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 R4GMQ9 66 aa14.07□□□□□ -0.16
MAP1LC3B-208ENST00000570189 OR2AT4A6NND4 320 aa14.06□□□□□ -0.16
MAP1LC3B-208ENST00000570189 AKR7A2O43488 359 aa14.06□□□□□ -0.16
MAP1LC3B-208ENST00000570189 SPRY1O43609 319 aaPredicted RBP14.06□□□□□ -0.16
MAP1LC3B-208ENST00000570189 NOS1APO75052 506 aaPredicted RBP14.06□□□□□ -0.16
MAP1LC3B-208ENST00000570189 NDUFA7O95182 113 aa14.06□□□□□ -0.16
MAP1LC3B-208ENST00000570189 ELF3P78545 371 aaPredicted RBP14.06□□□□□ -0.16
MAP1LC3B-208ENST00000570189 MFGE8Q08431 387 aaPredicted RBP14.06□□□□□ -0.16
MAP1LC3B-208ENST00000570189 TMED1Q13445 227 aa14.06□□□□□ -0.16
MAP1LC3B-208ENST00000570189 C1orf146Q5VVC0 180 aa14.06□□□□□ -0.16
MAP1LC3B-208ENST00000570189 VMO1Q7Z5L0 202 aa14.06□□□□□ -0.16
MAP1LC3B-208ENST00000570189 SLC35F2Q8IXU6 374 aa14.06□□□□□ -0.16
MAP1LC3B-208ENST00000570189 FGFRL1Q8N441 504 aa14.06□□□□□ -0.16
MAP1LC3B-208ENST00000570189 ZNF671Q8TAW3 534 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms