RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 CSNK2A3Q8NEV1 391 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 BBS1Q8NFJ9 593 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 OR10H4Q8NGA5 316 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 OR51G2Q8NGK0 314 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 TMEM163Q8TC26 289 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 ZNF418Q8TF45 676 aaPredicted RBP4.07□□□□□ -1.76
CNOT1-219ENST00000569882 TMEM158Q8WZ71 300 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 PIGCQ92535 297 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 DVL3Q92997 716 aaPredicted RBP4.07□□□□□ -1.76
CNOT1-219ENST00000569882 ERGIC1Q969X5 290 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 FAM71F1Q96KD3 344 aaPredicted RBP4.07□□□□□ -1.76
CNOT1-219ENST00000569882 MNTQ99583 582 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 CIB1Q99828 191 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 SLC30A2Q9BRI3 323 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 CHCHD6Q9BRQ6 235 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 C9orf16Q9BUW7 83 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 SSBP3Q9BWW4 388 aaPredicted RBP4.07□□□□□ -1.76
CNOT1-219ENST00000569882 NMNAT2Q9BZQ4 307 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 YIPF3Q9GZM5 350 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 VCXQ9H320 206 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 ABCB9Q9NP78 766 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 DDX28Q9NUL7 540 aaKnown RBP4.07□□□□□ -1.76
CNOT1-219ENST00000569882 C1orf123Q9NWV4 160 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 TMEM160Q9NX00 188 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 MRPL15Q9P015 296 aaKnown RBP4.07□□□□□ -1.76
CNOT1-219ENST00000569882 MIOXQ9UGB7 285 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 ZNF391Q9UJN7 358 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 PPIAL4AQ9Y536 164 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 LRP12Q9Y561 859 aa4.07□□□□□ -1.76
CNOT1-219ENST00000569882 ABCA2Q9BZC7 2435 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 SETD2Q9BYW2 2564 aaPredicted RBP4.06□□□□□ -1.76
CNOT1-219ENST00000569882 TRAV38-1A0A0B4J264 116 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 A0A1B0GVI7 797 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 FAM157AC9JC47 383 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 H0YL77 283 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 TMEM178BH3BS89 294 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 M0R129 80 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 EI24O14681 340 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 TCF21O43680 179 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 PLPP2O43688 288 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 PRKYO43930 277 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 FAM20BO75063 409 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 RP2O75695 350 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 RPP14O95059 124 aaKnown RBP4.06□□□□□ -1.76
CNOT1-219ENST00000569882 IGHV2-5P01817 119 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 ADH4P08319 380 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 TMEM11P17152 192 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 GATA3P23771 443 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 PITPNBP48739 271 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 DAPP51397 102 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 PSMD7P51665 324 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 CAPZA1P52907 286 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 ACTC1P68032 377 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 ACTA1P68133 377 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 MICBQ29980 383 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 ODF4Q2M2E3 257 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 ZIK1Q3SY52 487 aaPredicted RBP4.06□□□□□ -1.76
CNOT1-219ENST00000569882 TMEM155Q4W5P6 130 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 PRAMEF6Q5VXH4 476 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 SLX4IPQ5VYV7 408 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 PLCXD3Q63HM9 321 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 SFRP4Q6FHJ7 346 aaPredicted RBP4.06□□□□□ -1.76
CNOT1-219ENST00000569882 FAHD1Q6P587 224 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 ZNF322Q6U7Q0 402 aaPredicted RBP4.06□□□□□ -1.76
CNOT1-219ENST00000569882 ETV3LQ6ZN32 361 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 Q6ZR03 302 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 ZBTB49Q6ZSB9 765 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 RHOUQ7L0Q8 258 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 MEPCEQ7L2J0 689 aaKnown RBP4.06□□□□□ -1.76
CNOT1-219ENST00000569882 ZDHHC23Q8IYP9 409 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 SEMA6DQ8NFY4 1073 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 OR10S1Q8NGN2 331 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 OR8J1Q8NGP2 316 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 NANPQ8TBE9 248 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 RNF133Q8WVZ7 376 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 ZNRF4Q8WWF5 429 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 NEIL1Q96FI4 390 aaPredicted RBP4.06□□□□□ -1.76
CNOT1-219ENST00000569882 RNF170Q96K19 258 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 TEAD3Q99594 435 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 APOL4Q9BPW4 351 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 GABARAPL1Q9H0R8 117 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 MOB1AQ9H8S9 216 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 PNRC2Q9NPJ4 139 aaKnown RBP4.06□□□□□ -1.76
CNOT1-219ENST00000569882 CLN6Q9NWW5 311 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 ERVK-18Q9QC07 812 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 RNF7Q9UBF6 113 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 CLN8Q9UBY8 286 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 WARS2Q9UGM6 360 aaKnown RBP4.06□□□□□ -1.76
CNOT1-219ENST00000569882 GNG8Q9UK08 70 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 LRCH1Q9Y2L9 728 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 CHTOPQ9Y3Y2 248 aaKnown RBP4.06□□□□□ -1.76
CNOT1-219ENST00000569882 GMPPBQ9Y5P6 360 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 JMJD1CQ15652 2540 aa4.06□□□□□ -1.76
CNOT1-219ENST00000569882 FN1P02751 2386 aaKnown RBP4.06□□□□□ -1.76
CNOT1-219ENST00000569882 LOC105371242A0A075B767 164 aa4.05□□□□□ -1.76
CNOT1-219ENST00000569882 A0A096LNT2 108 aa4.05□□□□□ -1.76
CNOT1-219ENST00000569882 ZNF816-ZNF321PA0A0X1KG74 233 aa4.05□□□□□ -1.76
CNOT1-219ENST00000569882 DAPL1A0PJW8 107 aa4.05□□□□□ -1.76
CNOT1-219ENST00000569882 OOEPA6NGQ2 149 aa4.05□□□□□ -1.76
CNOT1-219ENST00000569882 ZAR1LA6NP61 321 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms