RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SKA2Q8WVK7 121 aaPredicted RBP2.56□□□□□ -2
HMGB1P6-201ENST00000569046 CACNG8Q8WXS5 425 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 SLC35A5Q9BS91 424 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 CHCHD5Q9BSY4 110 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 NDEL1Q9GZM8 345 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 RACGAP1Q9H0H5 632 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 OR51M1Q9H341 326 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 GOLPH3Q9H4A6 298 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 TRABDQ9H4I3 376 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 NIPAL2Q9H841 368 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 ZNF275Q9NSD4 429 aaPredicted RBP2.56□□□□□ -2
HMGB1P6-201ENST00000569046 PRR34Q9NV39 138 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 PAK1IP1Q9NWT1 392 aaPredicted RBP2.56□□□□□ -2
HMGB1P6-201ENST00000569046 THYN1Q9P016 225 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 STX18Q9P2W9 335 aaKnown RBP2.56□□□□□ -2
HMGB1P6-201ENST00000569046 SLC2A6Q9UGQ3 507 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 RSPH14Q9UHP6 348 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 KCNIP3Q9Y2W7 256 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 FAM215AQ9Y5M1 114 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 WIF1Q9Y5W5 379 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 NBEAL1Q6ZS30 2694 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 NSD1Q96L73 2696 aaPredicted RBP2.56□□□□□ -2
HMGB1P6-201ENST00000569046 MXRA5Q9NR99 2828 aa2.56□□□□□ -2
HMGB1P6-201ENST00000569046 ANK3Q12955 4377 aaKnown RBP2.56□□□□□ -2
HMGB1P6-201ENST00000569046 IGLV3-16A0A075B6K0 115 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 IGLV3-12A0A075B6K2 115 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 IGKV1-8A0A0C4DH67 115 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 GOLGA8QA0A0J9YX86 632 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 IQCMA0A1B0GVH7 501 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 TRPC5OSA6NMA1 111 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 ZNF99A8MXY4 864 aaPredicted RBP2.55□□□□□ -2
HMGB1P6-201ENST00000569046 TRDCB7Z8K6 153 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 KLRC4-KLRK1H3BQV0 150 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 GOSR2O14653 212 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 HSD17B6O14756 317 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 LIN7AO14910 233 aaPredicted RBP2.55□□□□□ -2
HMGB1P6-201ENST00000569046 HAT1O14929 419 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 PRKYO43930 277 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 CST8O60676 142 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 DNAJC13O75165 2243 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 NDUFS6O75380 124 aaKnown RBP2.55□□□□□ -2
HMGB1P6-201ENST00000569046 RDH16O75452 317 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 FCN3O75636 299 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 DYSFO75923 2080 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 PROSCO94903 275 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 LYPD3O95274 346 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 NUDT14O95848 222 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 IGHG1P01857 330 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 IFNW1P05000 195 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 RNH1P13489 461 aaKnown RBP2.55□□□□□ -2
HMGB1P6-201ENST00000569046 HSD17B1P14061 328 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 PMCHP20382 165 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 FGF9P31371 208 aaPredicted RBP2.55□□□□□ -2
HMGB1P6-201ENST00000569046 DNASE1L1P49184 302 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 CYB561P49447 251 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 TMED10P49755 219 aaKnown RBP2.55□□□□□ -2
HMGB1P6-201ENST00000569046 DAP3P51398 398 aaKnown RBP2.55□□□□□ -2
HMGB1P6-201ENST00000569046 PRKXP51817 358 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 CCNG1P51959 295 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 MFAP2P55001 183 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 NDUFV3P56181 108 aaKnown RBP2.55□□□□□ -2
HMGB1P6-201ENST00000569046 MLF1P58340 268 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 ERVK-16P61578 105 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 RND3P61587 244 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 ERVK-25P63136 954 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 LCN2P80188 198 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 CDH17Q12864 832 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 IL18R1Q13478 541 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 ABRAXAS2Q15018 415 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 PDK2Q15119 407 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 NSDHLQ15738 373 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 SLC25A30Q5SVS4 291 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 GPR107Q5VW38 600 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 ZNF57Q68EA5 555 aaPredicted RBP2.55□□□□□ -2
HMGB1P6-201ENST00000569046 C22orf42Q6IC83 251 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 PRMT9Q6P2P2 845 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 ASCL4Q6XD76 172 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 SLC25A48Q6ZT89 311 aaKnown RBP2.55□□□□□ -2
HMGB1P6-201ENST00000569046 SLC25A42Q86VD7 318 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 RBM45Q8IUH3 476 aaKnown RBP2.55□□□□□ -2
HMGB1P6-201ENST00000569046 LRRC8AQ8IWT6 810 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 CMTM1Q8IZ96 169 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 SELENOHQ8IZQ5 122 aaKnown RBP2.55□□□□□ -2
HMGB1P6-201ENST00000569046 CYP4Z2PQ8N1L4 340 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 LINC00469Q8N7U9 141 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 FNDC5Q8NAU1 212 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 EXPH5Q8NEV8 1989 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 OR10H4Q8NGA5 316 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 OR13C9Q8NGT0 318 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 OR2L8Q8NGY9 312 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 OR52E5Q8NH55 327 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 SPPL2AQ8TCT8 520 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 TCP10LQ8TDR4 215 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 ADAMTS16Q8TE57 1224 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 DOK4Q8TEW6 326 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 TFB1MQ8WVM0 346 aaKnown RBP2.55□□□□□ -2
HMGB1P6-201ENST00000569046 CCDC126Q96EE4 140 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 ARL5BQ96KC2 179 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 ZNF285Q96NJ3 590 aa2.55□□□□□ -2
HMGB1P6-201ENST00000569046 PRAP1Q96NZ9 151 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms