RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 CST2P09228 141 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 PAX6P26367 422 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 AVPR2P30518 371 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 CXCL12P48061 93 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 CAV2P51636 162 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 SUCLG1P53597 346 aaKnown RBP6.73□□□□□ -1.33
ATXN3-250ENST00000568290 DVL1P1P54792 670 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-250ENST00000568290 UCP3P55916 312 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 CLDN17P56750 224 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 RAB5BP61020 215 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 RAC1P63000 192 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 TFF2Q03403 129 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 FMODQ06828 376 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 DBPQ10586 325 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-250ENST00000568290 IL13RA2Q14627 380 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 ATXN7L3Q14CW9 347 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-250ENST00000568290 SRSF7Q16629 238 aaKnown RBP eCLIP6.73□□□□□ -1.33
ATXN3-250ENST00000568290 MICBQ29980 383 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 C2orf68Q2NKX9 166 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 MOGAT2Q3SYC2 334 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 TMEM176BQ3YBM2 270 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-250ENST00000568290 SLC22A6Q4U2R8 563 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 ZNF385CQ66K41 422 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-250ENST00000568290 ASPHD2Q6ICH7 369 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 H3F3CQ6NXT2 135 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 CFAP77Q6ZQR2 320 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 LANCL3Q6ZV70 420 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 GALNTL5Q7Z4T8 443 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 DPPA2Q7Z7J5 298 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 WDR5BQ86VZ2 330 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 LHFPL1Q86WI0 220 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 SFTPA2Q8IWL1 248 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 ZNF100Q8IYN0 542 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 LGI3Q8N145 548 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 TMEM54Q969K7 222 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 PMEPA1Q969W9 287 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 BORCS8Q96FH0 119 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 FOXN4Q96NZ1 517 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 OR6C1Q96RD1 312 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 ST6GALNAC5Q9BVH7 336 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 PECRQ9BY49 303 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 ULBP2Q9BZM5 246 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 RTN4RQ9BZR6 473 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 RIMS4Q9H426 269 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-250ENST00000568290 ZMAT3Q9HA38 289 aaKnown RBP6.73□□□□□ -1.33
ATXN3-250ENST00000568290 ELL3Q9HB65 397 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-250ENST00000568290 ZNF286AQ9HBT8 521 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 SMCO4Q9NRQ5 59 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 IL36GQ9NZH8 169 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 OSGIN2Q9Y236 505 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 MRPS18CQ9Y3D5 142 aaKnown RBP6.73□□□□□ -1.33
ATXN3-250ENST00000568290 PTRH2Q9Y3E5 179 aaKnown RBP6.73□□□□□ -1.33
ATXN3-250ENST00000568290 TMED3Q9Y3Q3 217 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 B3GALT1Q9Y5Z6 326 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 LHFPL6Q9Y693 200 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 MTCH2Q9Y6C9 303 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 F5P12259 2224 aa6.73□□□□□ -1.33
ATXN3-250ENST00000568290 HTTP42858 3142 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 PCNTO95613 3336 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 LOC102723996A0A087X1L8 192 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 TRIM77I1YAP6 450 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 M0R135 149 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 DIRAS3O95661 229 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 TSPAN15O95858 294 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 IGLV3-1P01715 115 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 H2AFB1P0C5Y9 115 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 SEC11BP0C7V7 166 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 TMEM225BP0DP42 221 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 FGF5P12034 268 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 FCGR2AP12318 317 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 DUSP1P28562 367 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 RPL12P30050 165 aaKnown RBP6.72□□□□□ -1.33
ATXN3-250ENST00000568290 DHPSP49366 369 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-250ENST00000568290 HOXA1P49639 335 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-250ENST00000568290 RBP2P50120 134 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 SULT1A2P50226 295 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 NPY4RP50391 375 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 FUT6P51993 359 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 RAC3P60763 192 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 S100A10P60903 97 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 HERV-K104P61576 105 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 RAB1AP62820 205 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 HIST1H3AP68431 136 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 MALLQ13021 153 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 COL9A2Q14055 689 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-250ENST00000568290 ZNF266Q14584 549 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 GUCA2BQ16661 112 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 IAH1Q2TAA2 248 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-250ENST00000568290 C10orf91Q5T1B1 145 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 AVPI1Q5T686 147 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 RIPPLY2Q5TAB7 128 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 HIST2H3PS2Q5TEC6 136 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 STPG1Q5TH74 334 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 FAM27BQ5VT28 67 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 LYSMD4Q5XG99 296 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 DHRS7BQ6IAN0 325 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-250ENST00000568290 OR52W1Q6IF63 320 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 OR10K2Q6IF99 312 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 CORO6Q6QEF8 472 aa6.72□□□□□ -1.33
ATXN3-250ENST00000568290 HIST2H3AQ71DI3 136 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms