RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 MBD3L2Q8NHZ7 208 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-221ENST00000567935 GPER1Q99527 375 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 SOX7Q9BT81 388 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 CST11Q9H112 138 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 B3GNT2Q9NY97 397 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 MTFP1Q9UDX5 166 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 NUBP2Q9Y5Y2 271 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 RTTNQ86VV8 2226 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 TRAV18A0A075B6X5 111 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 IGKV1-9A0A0C4DH69 117 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 ZNF816-ZNF321PA0A0X1KG74 233 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 C5orf63A6NC05 138 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 FIGNL2A6NMB9 653 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 CSF1P09603 554 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 TMIGD3P0DMS9 266 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-221ENST00000567935 VSIG8P0DPA2 414 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 APLNRP35414 380 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 ARL6IP1Q15041 203 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 KISS1Q15726 138 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 GSG1Q2KHT4 349 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 TBRG1Q3YBR2 411 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 C9orf135Q5VTT2 229 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 RSBN1Q5VWQ0 802 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-221ENST00000567935 OLFML2AQ68BL7 652 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 FAM180AQ6UWF9 173 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 ZNF101Q8IZC7 436 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 OR5L1Q8NGL2 311 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 PIGTQ969N2 578 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 POM121L2Q96KW2 1035 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 URM1Q9BTM9 101 aaKnown RBP12.65□□□□□ -0.38
COMMD4-221ENST00000567935 ACTR6Q9GZN1 396 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 AUNIPQ9H7T9 357 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 NLKQ9UBE8 527 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 OSGIN2Q9Y236 505 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 ZNF469Q96JG9 3925 aaPredicted RBP12.65□□□□□ -0.38
COMMD4-221ENST00000567935 PKDREJQ9NTG1 2253 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 DOCK7Q96N67 2140 aa12.65□□□□□ -0.38
COMMD4-221ENST00000567935 MEIOCA2RUB1 952 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 LPLP06858 475 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 NAT2P11245 290 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 COX5AP20674 150 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 ANOS1P23352 680 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 PTGFRP43088 359 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 FOXG1P55316 489 aaPredicted RBP12.64□□□□□ -0.39
COMMD4-221ENST00000567935 UBE2NP61088 152 aaKnown RBP12.64□□□□□ -0.39
COMMD4-221ENST00000567935 FAM3AP98173 230 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 PLA2G7Q13093 441 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 C1QTNF12Q5T7M4 302 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 GLIPR1L1Q6UWM5 242 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 LHFPL2Q6ZUX7 228 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 ZNF295-AS1Q8N0V1 137 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 C17orf78Q8N4C9 275 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 FTMTQ8N4E7 242 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 C9orf106Q8NAJ2 232 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 ST6GALNAC3Q8NDV1 305 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 CSNK2A3Q8NEV1 391 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 OR5M9Q8NGP3 310 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 GPX8Q8TED1 209 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 S100A13Q99584 98 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 MMP28Q9H239 520 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 MOV10Q9HCE1 1003 aaKnown RBP12.64□□□□□ -0.39
COMMD4-221ENST00000567935 OBP2BQ9NPH6 170 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 PLSCR4Q9NRQ2 329 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 ETAA1Q9NY74 926 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 KCNN3Q9UGI6 736 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 SLC7A11Q9UPY5 501 aa12.64□□□□□ -0.39
COMMD4-221ENST00000567935 LOC100509620A0A075B734 347 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 C5orf49A4QMS7 147 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 INMT-MINDY4F8WBC2 141 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 KDM4BO94953 1096 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 DHFRP00374 187 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 MELTFP08582 738 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 EDN3P14138 238 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 ACKR3P25106 362 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 HLA-DMAP28067 261 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 KIR2DL2P43627 348 aaPredicted RBP12.63□□□□□ -0.39
COMMD4-221ENST00000567935 ZNF92Q03936 586 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 UNC119Q13432 240 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 UBE2V2Q15819 145 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 TBC1D28Q2M2D7 210 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 AKAP14Q86UN6 197 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 PAQR4Q8N4S7 273 aaPredicted RBP12.63□□□□□ -0.39
COMMD4-221ENST00000567935 STEAP2Q8NFT2 490 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 OR2AE1Q8NHA4 323 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 C1orf147Q96MC9 270 aaPredicted RBP12.63□□□□□ -0.39
COMMD4-221ENST00000567935 REPIN1Q9BWE0 567 aaKnown RBP12.63□□□□□ -0.39
COMMD4-221ENST00000567935 TMEM59Q9BXS4 323 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 CACNG6Q9BXT2 260 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 PCDHB16Q9NRJ7 776 aa12.63□□□□□ -0.39
COMMD4-221ENST00000567935 GTF3C1Q12789 2109 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 RAB27BO00194 218 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 GMDSO60547 372 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 ICMTO60725 284 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 ZNF780AO75290 641 aaPredicted RBP12.62□□□□□ -0.39
COMMD4-221ENST00000567935 NRASP01111 189 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 GSTP1P09211 210 aaKnown RBP12.62□□□□□ -0.39
COMMD4-221ENST00000567935 COX6B1P14854 86 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 IGHV1-2P23083 117 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 HOXC12P31275 282 aa12.62□□□□□ -0.39
COMMD4-221ENST00000567935 BTCP35070 178 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms