RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 MTRF1O75570 445 aaKnown RBP3.96□□□□□ -1.78
CLK3-219ENST00000567805 FCN3O75636 299 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 SFTPBP07988 381 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 MMP9P14780 707 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 EPHA2P29317 976 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 GPM6AP51674 278 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 RIDAP52758 137 aaKnown RBP3.96□□□□□ -1.78
CLK3-219ENST00000567805 CXCR4P61073 352 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 GNG3P63215 75 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 EFNB1P98172 346 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 EGR3Q06889 387 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 RIPPLY1Q0D2K3 151 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 PDCD1Q15116 288 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 SLC9A3R2Q15599 337 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 CEACAM21Q3KPI0 293 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 CDONQ4KMG0 1287 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 AWAT1Q58HT5 328 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 LRRC10Q5BKY1 277 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 WDR38Q5JTN6 314 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 ATPAF1Q5TC12 328 aaPredicted RBP3.96□□□□□ -1.78
CLK3-219ENST00000567805 AADACL4Q5VUY2 407 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 NXNL2Q5VZ03 156 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 C12orf73Q69YU5 71 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 STUMQ69YW2 141 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 BRD3OSQ6XYD6 125 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 KCTD8Q6ZWB6 473 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 BTN2A1Q7KYR7 527 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 MEPCEQ7L2J0 689 aaKnown RBP3.96□□□□□ -1.78
CLK3-219ENST00000567805 THAP5Q7Z6K1 395 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 COMMD2Q86X83 199 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 TCEANCQ8N8B7 351 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 SCCPDHQ8NBX0 429 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 LY6G5BQ8NDX9 201 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 OR5A2Q8NGI9 324 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 SGMS2Q8NHU3 365 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 TMEM163Q8TC26 289 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 OR51E1Q8TCB6 317 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 HPSE2Q8WWQ2 592 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 GATAD2BQ8WXI9 593 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 LRTOMTQ8WZ04 291 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 ST8SIA4Q92187 359 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 RNF170Q96K19 258 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 WDFY2Q96P53 400 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 DUX5Q96PT3 197 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 RAB3IPQ96QF0 476 aaPredicted RBP3.96□□□□□ -1.78
CLK3-219ENST00000567805 HIST1H2AAQ96QV6 131 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 OR8B4Q96RC9 309 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 CCL13Q99616 98 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 CIB1Q99828 191 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 PCGF1Q9BSM1 259 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 OSBPL10Q9BXB5 764 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 GABARAPL3Q9BY60 117 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 PBOV1Q9GZY1 135 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 RASSF4Q9H2L5 321 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 PRDM13Q9H4Q3 707 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 PPP1R3EQ9H7J1 279 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 CNTD2Q9H8S5 307 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 MOB1AQ9H8S9 216 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 NOX4Q9NPH5 578 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 GPR84Q9NQS5 396 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 CLN6Q9NWW5 311 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 HAO2Q9NYQ3 351 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 H2AFY2Q9P0M6 372 aaPredicted RBP3.96□□□□□ -1.78
CLK3-219ENST00000567805 NUFIP1Q9UHK0 495 aaKnown RBP3.96□□□□□ -1.78
CLK3-219ENST00000567805 RPUSD1Q9UJJ7 312 aaKnown RBP3.96□□□□□ -1.78
CLK3-219ENST00000567805 IKZF2Q9UKS7 526 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 COPS3Q9UNS2 423 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 KPTNQ9Y664 436 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 PKD1L1Q8TDX9 2849 aa3.96□□□□□ -1.78
CLK3-219ENST00000567805 NBEAL1Q6ZS30 2694 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 DSCAML1Q8TD84 2053 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 IGHV1-69DA0A0B4J2H0 117 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 CENPVL3A0A0U1RRI6 287 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 A0A1B0GVI7 797 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 MDFIC2A0A1B0GVS7 189 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 A0A1B0GW55 424 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 OR2AT4A6NND4 320 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 DHRS7CA6NNS2 312 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 PRR32B1ATL7 298 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 ZNF732B4DXR9 585 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 ZNF670-ZNF695F2Z2N8 137 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 LOC110117498-PIK3R3F6TDL0 507 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 M0R129 80 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 HOXA3O43365 443 aaPredicted RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 AKR7A2O43488 359 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 NDUFB3O43676 98 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 MITFO75030 526 aaPredicted RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 SRSF10O75494 262 aaKnown RBP3.95□□□□□ -1.78
CLK3-219ENST00000567805 CIB2O75838 187 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 DHRS3O75911 302 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 NRASP01111 189 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 IGHV1-69P01742 117 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 TTRP02766 147 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 OR2T7P0C7T2 308 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 DUX4L2P0CJ85 424 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 DUX4L3P0CJ86 424 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 DUX4L4P0CJ87 422 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 DUX4L5P0CJ88 424 aa3.95□□□□□ -1.78
CLK3-219ENST00000567805 DUX4L6P0CJ89 424 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms