RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PDZD9Q8IXQ8 264 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 ZNF511Q8NB15 262 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 OR51G2Q8NGK0 314 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 C8orf46Q8TAG6 207 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 TMEM54Q969K7 222 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 MCHR2Q969V1 340 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 ISOC1Q96CN7 298 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 NR1H4Q96RI1 486 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-216ENST00000567071 CITED4Q96RK1 184 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 SIGLEC11Q96RL6 698 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 DCTN5Q9BTE1 182 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 MCRIP2Q9BUT9 160 aaKnown RBP7.94□□□□□ -1.14
CAPN3-216ENST00000567071 FAM234AQ9H0X4 552 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 MSL2Q9HCI7 577 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 PAK1IP1Q9NWT1 392 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-216ENST00000567071 SCN3BQ9NY72 215 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 GLTPQ9NZD2 209 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 ZNF224Q9NZL3 707 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 BLOC1S6Q9UL45 172 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.94□□□□□ -1.14
CAPN3-216ENST00000567071 COA3Q9Y2R0 106 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-216ENST00000567071 STARD9Q9P2P6 4700 aa7.94□□□□□ -1.14
CAPN3-216ENST00000567071 CENPBD1B2RD01 187 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 C22orf46C9J442 243 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 PTGES3LE9PB15 166 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 J3QL48 77 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 AHCYL1O43865 530 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 SELENOFO60613 162 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 RAMP3O60896 148 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 GLCEO94923 617 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 TNFAIP8O95379 198 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 HLA-DQA2P01906 255 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 LYNP07948 512 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 CCDC159P0C7I6 412 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 PATE4P0C8F1 98 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 NR2C1P13056 603 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 CCNOP22674 350 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 CHATP28329 748 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 ATP6V1E1P36543 226 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 MPV17P39210 176 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 CXCR4P61073 352 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 HNRNPA0Q13151 305 aaKnown RBP7.93□□□□□ -1.14
CAPN3-216ENST00000567071 HIST3H3Q16695 136 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 MEP1BQ16820 701 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 KCTD21Q4G0X4 260 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 SPRNQ5BIV9 151 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 ARSJQ5FYB0 599 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-216ENST00000567071 SLC35D3Q5M8T2 416 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 LINC01590Q5TEZ4 76 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 MBNL2Q5VZF2 373 aaKnown RBP7.93□□□□□ -1.14
CAPN3-216ENST00000567071 LRFN4Q6PJG9 635 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 SLC25A47Q6Q0C1 308 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 ZBTB46Q86UZ6 589 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 ERI1Q8IV48 349 aaKnown RBP7.93□□□□□ -1.14
CAPN3-216ENST00000567071 C1orf87Q8N0U7 546 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 OR2Z1Q8NG97 314 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 PPP1R35Q8TAP8 253 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 GGHQ92820 318 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 LGALS12Q96DT0 336 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 CNN2Q99439 309 aaKnown RBP7.93□□□□□ -1.14
CAPN3-216ENST00000567071 TEAD3Q99594 435 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 TMEM246Q9BRR3 403 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 COPS4Q9BT78 406 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 TTTY10Q9BZA0 68 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 ZMAT4Q9H898 229 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 ADGRL4Q9HBW9 690 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 ERVK-18Q9QC07 812 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 WARS2Q9UGM6 360 aaKnown RBP7.93□□□□□ -1.14
CAPN3-216ENST00000567071 IL19Q9UHD0 177 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 PSORS1C1Q9UIG5 152 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 TPRKBQ9Y3C4 175 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 RPL36Q9Y3U8 105 aaKnown RBP7.93□□□□□ -1.14
CAPN3-216ENST00000567071 UGT2A1Q9Y4X1 527 aa7.93□□□□□ -1.14
CAPN3-216ENST00000567071 EFCAB10A6NFE3 127 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 LRRC30A6NM36 301 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 H3BSA7 217 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 ZNF205O95201 554 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 MT-ND2P03891 347 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 HTR1AP08908 422 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 PSKH1P11801 424 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 CDAP32320 146 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 RPS27P42677 84 aaKnown RBP7.92□□□□□ -1.14
CAPN3-216ENST00000567071 GATA4P43694 442 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 SLC15A1P46059 708 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 ZNF84P51523 738 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 GABARAPL2P60520 117 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 ST3GAL4Q11206 333 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 SLC36A2Q495M3 483 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 C10orf128Q5T292 105 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 KCTD18Q6PI47 426 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-216ENST00000567071 GLB1L2Q8IW92 636 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 STX19Q8N4C7 294 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 SLC26A10Q8NG04 563 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 OR10H4Q8NGA5 316 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 OR52I1Q8NGK6 324 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 OR6N2Q8NGY6 317 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 FNDC8Q8TC99 324 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 KLF14Q8TD94 323 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-216ENST00000567071 GATAD1Q8WUU5 269 aa7.92□□□□□ -1.14
CAPN3-216ENST00000567071 ITLN1Q8WWA0 313 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms