RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 CEACAM21Q3KPI0 293 aa26.16■■□□□ 1.78
CTCF-203ENST00000566078 UBE2NLQ5JXB2 153 aa26.16■■□□□ 1.78
CTCF-203ENST00000566078 SPANXN2Q5MJ10 180 aa26.16■■□□□ 1.78
CTCF-203ENST00000566078 SYNPRQ8TBG9 265 aa26.16■■□□□ 1.78
CTCF-203ENST00000566078 TMEM171Q8WVE6 324 aa26.16■■□□□ 1.78
CTCF-203ENST00000566078 DIRAS2Q96HU8 199 aa26.16■■□□□ 1.78
CTCF-203ENST00000566078 IGKV1-27A0A075B6S5 117 aa26.15■■□□□ 1.78
CTCF-203ENST00000566078 LOC100289279A0A1B0GTE1 492 aa26.15■■□□□ 1.78
CTCF-203ENST00000566078 C2orf76Q3KRA6 126 aa26.15■■□□□ 1.78
CTCF-203ENST00000566078 ADAM5Q6NVV9 412 aa26.15■■□□□ 1.78
CTCF-203ENST00000566078 LRRC28Q86X40 367 aaPredicted RBP26.15■■□□□ 1.78
CTCF-203ENST00000566078 ANGPTL5Q86XS5 388 aa26.15■■□□□ 1.78
CTCF-203ENST00000566078 HIST1H2AAQ96QV6 131 aa26.15■■□□□ 1.78
CTCF-203ENST00000566078 CXorf56Q9H5V9 222 aa26.15■■□□□ 1.78
CTCF-203ENST00000566078 ATP23Q9Y6H3 246 aa26.15■■□□□ 1.78
CTCF-203ENST00000566078 ZNF250P15622 560 aa26.14■■□□□ 1.78
CTCF-203ENST00000566078 ETV6P41212 452 aa26.14■■□□□ 1.78
CTCF-203ENST00000566078 MMP15P51511 669 aa26.14■■□□□ 1.78
CTCF-203ENST00000566078 ATP1B3P54709 279 aa26.14■■□□□ 1.78
CTCF-203ENST00000566078 ZNF846Q147U1 533 aa26.14■■□□□ 1.78
CTCF-203ENST00000566078 CNIH2Q6PI25 160 aa26.14■■□□□ 1.78
CTCF-203ENST00000566078 ITPKCQ96DU7 683 aa26.14■■□□□ 1.78
CTCF-203ENST00000566078 WDR12Q9GZL7 423 aaKnown RBP26.14■■□□□ 1.78
CTCF-203ENST00000566078 FGF23Q9GZV9 251 aaPredicted RBP26.14■■□□□ 1.78
CTCF-203ENST00000566078 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP26.14■■□□□ 1.77
CTCF-203ENST00000566078 GLIPR1L1Q6UWM5 242 aa26.14■■□□□ 1.77
CTCF-203ENST00000566078 OR8G5Q8NG78 346 aa26.14■■□□□ 1.77
CTCF-203ENST00000566078 TNFAIP8L1Q8WVP5 186 aa26.14■■□□□ 1.77
CTCF-203ENST00000566078 OR5P3Q8WZ94 311 aa26.14■■□□□ 1.77
CTCF-203ENST00000566078 SLC25A38Q96DW6 304 aa26.14■■□□□ 1.77
CTCF-203ENST00000566078 ADAT1Q9BUB4 502 aaKnown RBP26.14■■□□□ 1.77
CTCF-203ENST00000566078 DUSP13Q9UII6 198 aa26.14■■□□□ 1.77
CTCF-203ENST00000566078 TMEM272A0A1B0GTI8 110 aa26.13■■□□□ 1.77
CTCF-203ENST00000566078 BPNT1O95861 308 aa26.13■■□□□ 1.77
CTCF-203ENST00000566078 APOA1P02647 267 aa26.13■■□□□ 1.77
CTCF-203ENST00000566078 GPM6AP51674 278 aa26.13■■□□□ 1.77
CTCF-203ENST00000566078 CAPZA1P52907 286 aa26.13■■□□□ 1.77
CTCF-203ENST00000566078 PLA2G7Q13093 441 aa26.13■■□□□ 1.77
CTCF-203ENST00000566078 LRP11Q86VZ4 500 aa26.13■■□□□ 1.77
CTCF-203ENST00000566078 CMTM3Q96MX0 182 aa26.13■■□□□ 1.77
CTCF-203ENST00000566078 POU2F3Q9UKI9 436 aa26.13■■□□□ 1.77
CTCF-203ENST00000566078 PQLC2LA1A4F0 135 aa26.12■■□□□ 1.77
CTCF-203ENST00000566078 PTGFRP43088 359 aa26.12■■□□□ 1.77
CTCF-203ENST00000566078 KLF3P57682 345 aaPredicted RBP26.12■■□□□ 1.77
CTCF-203ENST00000566078 OR5A2Q8NGI9 324 aa26.12■■□□□ 1.77
CTCF-203ENST00000566078 OR8S1Q8NH09 359 aa26.12■■□□□ 1.77
CTCF-203ENST00000566078 SYT3Q9BQG1 590 aa26.12■■□□□ 1.77
CTCF-203ENST00000566078 CA10Q9NS85 328 aa26.12■■□□□ 1.77
CTCF-203ENST00000566078 MYEF2Q9P2K5 600 aaKnown RBP26.12■■□□□ 1.77
CTCF-203ENST00000566078 EXTL2Q9UBQ6 330 aa26.12■■□□□ 1.77
CTCF-203ENST00000566078 PYCARD-AS1I3L0S3 204 aa26.11■■□□□ 1.77
CTCF-203ENST00000566078 PLATP00750 562 aa26.11■■□□□ 1.77
CTCF-203ENST00000566078 CD3EP07766 207 aa26.11■■□□□ 1.77
CTCF-203ENST00000566078 EVX1P49640 407 aa26.11■■□□□ 1.77
CTCF-203ENST00000566078 ZP1P60852 638 aa26.11■■□□□ 1.77
CTCF-203ENST00000566078 ZNF45Q02386 682 aa26.11■■□□□ 1.77
CTCF-203ENST00000566078 MADCAM1Q13477 382 aa26.11■■□□□ 1.77
CTCF-203ENST00000566078 BEX5Q5H9J7 111 aa26.11■■□□□ 1.77
CTCF-203ENST00000566078 RNF170Q96K19 258 aa26.11■■□□□ 1.77
CTCF-203ENST00000566078 TMEM100Q9NV29 134 aa26.11■■□□□ 1.77
CTCF-203ENST00000566078 RHBDL2Q9NX52 303 aa26.11■■□□□ 1.77
CTCF-203ENST00000566078 V9GYH0 126 aa26.11■■□□□ 1.77
CTCF-203ENST00000566078 FAM208BQ5VWN6 2430 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 ZNF732B4DXR9 585 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 RANBP1P43487 201 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 ART1P52961 327 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 CMTM4Q8IZR5 234 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 OR4M1Q8NGD0 313 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 CYSLTR2Q9NS75 346 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 ING4Q9UNL4 249 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 FLNCQ14315 2725 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 CHD6Q8TD26 2715 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 IGHV3-13P01766 116 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 TALDO1P37837 337 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 EFNB2P52799 333 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 OR8G1Q15617 311 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 OR10K2Q6IF99 312 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 FAM131AQ6UXB0 335 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 DMRTC2Q8IXT2 367 aaPredicted RBP26.1■■□□□ 1.77
CTCF-203ENST00000566078 RTL8AQ9BWD3 113 aa26.1■■□□□ 1.77
CTCF-203ENST00000566078 MRPL37Q9BZE1 423 aaKnown RBP26.1■■□□□ 1.77
CTCF-203ENST00000566078 OR5B21A6NL26 309 aa26.09■■□□□ 1.77
CTCF-203ENST00000566078 SHISA9B4DS77 424 aa26.09■■□□□ 1.77
CTCF-203ENST00000566078 J3QRK9 145 aa26.09■■□□□ 1.77
CTCF-203ENST00000566078 LDLRAD4O15165 306 aa26.09■■□□□ 1.77
CTCF-203ENST00000566078 UBBP0CG47 229 aa26.09■■□□□ 1.77
CTCF-203ENST00000566078 C1QL2Q7Z5L3 287 aa26.09■■□□□ 1.77
CTCF-203ENST00000566078 DTX3Q8N9I9 347 aa26.09■■□□□ 1.77
CTCF-203ENST00000566078 MRPL24Q96A35 216 aaKnown RBP26.09■■□□□ 1.77
CTCF-203ENST00000566078 C1orf147Q96MC9 270 aaPredicted RBP26.09■■□□□ 1.77
CTCF-203ENST00000566078 S100A13Q99584 98 aa26.09■■□□□ 1.77
CTCF-203ENST00000566078 MICU1Q9BPX6 476 aa26.09■■□□□ 1.77
CTCF-203ENST00000566078 ZNF442Q9H7R0 627 aa26.09■■□□□ 1.77
CTCF-203ENST00000566078 RALYQ9UKM9 306 aaKnown RBP26.09■■□□□ 1.77
CTCF-203ENST00000566078 IGLV3-9A0A075B6K5 115 aa26.08■■□□□ 1.77
CTCF-203ENST00000566078 FABP12A6NFH5 140 aa26.08■■□□□ 1.77
CTCF-203ENST00000566078 SIAH2O43255 324 aa26.08■■□□□ 1.77
CTCF-203ENST00000566078 SPRY1O43609 319 aaPredicted RBP26.08■■□□□ 1.77
CTCF-203ENST00000566078 TMEM225BP0DP42 221 aa26.08■■□□□ 1.77
CTCF-203ENST00000566078 VSIG8P0DPA2 414 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms