RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 SEH1LQ96EE3 360 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 FAM71F1Q96KD3 344 aaPredicted RBP11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 JMJD8Q96S16 334 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 MICU1Q9BPX6 476 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 MS4A7Q9GZW8 240 aaPredicted RBP11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 AMBNQ9NP70 447 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 ZNF391Q9UJN7 358 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 PCDHGB1Q9Y5G3 927 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 SOX21Q9Y651 276 aaPredicted RBP11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 HSPE1-MOB4S4R3N1 261 aa11.35□□□□□ -0.59
VPS9D1-204ENST00000565023 TRAV38-1A0A0B4J264 116 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 A0A0U1RQV5 110 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 METTL15A6NJ78 407 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 C22orf46C9J442 243 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 CDIPTO14735 213 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 PTBP3O95758 552 aaKnown RBP11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 IGLV3-1P01715 115 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 KRT8P05787 483 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 GNAO1P09471 354 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 PAX2Q02962 417 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 MFGE8Q08431 387 aaPredicted RBP11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 RAB40BQ12829 278 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 KCNJ8Q15842 424 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 C12orf54Q6X4T0 127 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 RBMS3Q6XE24 437 aaKnown RBP11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 ZNF841Q6ZN19 808 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 PLEKHG7Q6ZR37 379 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 FAM90A1Q86YD7 464 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 C11orf53Q8IXP5 236 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 FGFRL1Q8N441 504 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 ACBD7Q8N6N7 88 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 PLPP7Q8NBV4 271 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 TFAP2CQ92754 450 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 RPL3LQ92901 407 aaKnown RBP11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 RNF170Q96K19 258 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 RTL8AQ9BWD3 113 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 PBOV1Q9GZY1 135 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 MOB1AQ9H8S9 216 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 SMURF1Q9HCE7 757 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 ESM1Q9NQ30 184 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 NUFIP1Q9UHK0 495 aaKnown RBP11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 RPL36Q9Y3U8 105 aaKnown RBP11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 R4GMQ9 66 aa11.34□□□□□ -0.59
VPS9D1-204ENST00000565023 A0A1B0GW55 424 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 LOC110117498-PIK3R3F6TDL0 507 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 ATP6V1G2O95670 118 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 FADS2O95864 444 aaKnown RBP11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 DUX4L2P0CJ85 424 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 DUX4L3P0CJ86 424 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 DUX4L4P0CJ87 422 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 DUX4L5P0CJ88 424 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 DUX4L6P0CJ89 424 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 DUX4L7P0CJ90 424 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 PSMB10P40306 273 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 FGF12P61328 243 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 SMN1Q16637 294 aaKnown RBP11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 CDONQ4KMG0 1287 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 CEP78Q5JTW2 689 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 DUX4L9Q6RFH8 374 aaPredicted RBP11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 WDR82Q6UXN9 313 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 FTMTQ8N4E7 242 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 YIPF7Q8N8F6 280 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 ZDHHC22Q8N966 263 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 OR5T2Q8NGG2 359 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 CNIH3Q8TBE1 160 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 ST8SIA4Q92187 359 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 ITFG2Q969R8 447 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 ITPKCQ96DU7 683 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 HIST1H2AAQ96QV6 131 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 CCL13Q99616 98 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 PCGF1Q9BSM1 259 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 SNTG1Q9NSN8 517 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 DUX4Q9UBX2 424 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 MYRFQ9Y2G1 1151 aa11.33□□□□□ -0.6
VPS9D1-204ENST00000565023 KIR2DS1A0A191URI9 304 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 MDFIC2A0A1B0GVS7 189 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 DAPL1A0PJW8 107 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 H3BSH0 61 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 DVL1O14640 695 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 TMPRSS2O15393 492 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 ENSAO43768 121 aaKnown RBP11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 FSTL3O95633 263 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 IGHA1P01876 353 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 TFF1P04155 84 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 CPT2P23786 658 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 GPM6AP51674 278 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 AQP4P55087 323 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 SNCBQ16143 134 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 KLHL22Q53GT1 634 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 BRD3OSQ6XYD6 125 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 USP43Q70EL4 1123 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 MOB3CQ70IA8 216 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 KCTD20Q7Z5Y7 419 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 THAP5Q7Z6K1 395 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 EGFL6Q8IUX8 553 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 ZDHHC23Q8IYP9 409 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 ELMOD2Q8IZ81 293 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 C8orf59Q8N0T1 100 aaPredicted RBP11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 OR52I1Q8NGK6 324 aa11.32□□□□□ -0.6
VPS9D1-204ENST00000565023 OR51E1Q8TCB6 317 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms