RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-210	ENST00000564582	CA11	O75493	328 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	MMP23A	O75900	390 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	APOD	P05090	189 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	HMGN2	P05204	90 aa	Known RBP	4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	HIST1H2BJ	P06899	126 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF735	P0CB33	412 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	GPR89B	P0CG08	455 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	CT45A8	P0DMV1	189 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	CT45A9	P0DMV2	189 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	RPS4Y1	P22090	263 aa	Known RBP	4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	HIST1H2BO	P23527	126 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	RPL12	P30050	165 aa	Known RBP	4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	OR10J1	P30954	320 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	IL2RG	P31785	369 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	HIST1H2BB	P33778	126 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	CSNK1A1	P48729	337 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF84	P51523	738 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	AKR1C2	P52895	323 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	CEBPG	P53567	150 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	FAM3B	P58499	235 aa	Predicted RBP	4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	HIST1H2BD	P58876	126 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	RPS23	P62266	143 aa	Known RBP	4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	LSM6	P62312	80 aa	Known RBP	4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	ARF6	P62330	175 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	HIST1H2BC	P62807	126 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	HIST1H3A	P68431	136 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	SRPX	P78539	464 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	BTG2	P78543	158 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	AKR1C1	Q04828	323 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	CXCL9	Q07325	125 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	GAMT	Q14353	236 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	IL13RA2	Q14627	380 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	OR1Q1	Q15612	314 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	HIST2H2BE	Q16778	126 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	FAM110C	Q1W6H9	321 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	C2orf68	Q2NKX9	166 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	C2orf76	Q3KRA6	126 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	MPPE1	Q53F39	396 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	TP53I3	Q53FA7	332 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	CT45A2	Q5DJT8	189 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	C1orf100	Q5SVJ3	147 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	COL5A1-AS1	Q5SY13	56 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	NCMAP	Q5T1S8	102 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	C1orf194	Q5T5A4	169 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	C1orf189	Q5VU69	101 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	OR2A2	Q6IF42	318 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	FAM166A	Q6J272	317 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	DEGS2	Q6QHC5	323 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	SLC39A5	Q6ZMH5	540 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	LANCL3	Q6ZV70	420 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	HOGA1	Q86XE5	327 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF619	Q8N2I2	560 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	PRSS35	Q8N3Z0	413 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF615	Q8N8J6	731 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	OR10AD1	Q8NGE0	317 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	OR52L2P	Q8NGH6	319 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	OR51L1	Q8NGJ5	315 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	OR5L2	Q8NGL0	311 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	OR10J5	Q8NHC4	309 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	PRSS3P2	Q8NHM4	247 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	MRGPRD	Q8TDS7	321 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	DTD1	Q8TEA8	209 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	LIPH	Q8WWY8	451 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	C22orf15	Q8WYQ4	148 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	HIST1H2BH	Q93079	126 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	EID2B	Q96D98	161 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	FAM210B	Q96KR6	192 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	YPEL4	Q96NS1	127 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	OR7D2	Q96RA2	312 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	INTS14	Q96SY0	518 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	TBX5	Q99593	518 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	HIST1H2BN	Q99877	126 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	HIST1H2BM	Q99879	126 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	GINS3	Q9BRX5	216 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	RNF126	Q9BV68	326 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	GPR174	Q9BXC1	333 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	SELENOI	Q9C0D9	397 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	OR11A1	Q9GZK7	315 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	PRSS22	Q9GZN4	317 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	OPN3	Q9H1Y3	402 aa	Predicted RBP	4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	GLIPR2	Q9H4G4	154 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	SRD5A3	Q9H8P0	318 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	SPG21	Q9NZD8	308 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	KLHL13	Q9P2N7	655 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	CACNG4	Q9UBN1	327 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	PRODH2	Q9UF12	536 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	CHRNA9	Q9UGM1	479 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	SLC7A7	Q9UM01	511 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	ZNF337	Q9Y3M9	751 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	YIPF1	Q9Y548	306 aa		4.91	□□□□□ -1.62
CHD9-210	ENST00000564582	PLXNA3	P51805	1871 aa		4.9	□□□□□ -1.62
CHD9-210	ENST00000564582	TRAV1-1	A0A0B4J248	108 aa		4.9	□□□□□ -1.63
CHD9-210	ENST00000564582	C13orf42	A0A1B0GVH6	325 aa		4.9	□□□□□ -1.63
CHD9-210	ENST00000564582	CPED1	A4D0V7	1026 aa		4.9	□□□□□ -1.63
CHD9-210	ENST00000564582	CASTOR2	A6NHX0	329 aa		4.9	□□□□□ -1.63
CHD9-210	ENST00000564582	FAM183A	A6NL82	134 aa		4.9	□□□□□ -1.63
CHD9-210	ENST00000564582	PLPP1	O14494	284 aa		4.9	□□□□□ -1.63
CHD9-210	ENST00000564582	PHOX2A	O14813	284 aa		4.9	□□□□□ -1.63
CHD9-210	ENST00000564582	PIN1P1	O15428	100 aa		4.9	□□□□□ -1.63

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