RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 PGA3P0DJD8 388 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 PGA5P0DJD9 388 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 CALM1P0DP23 149 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 CALM2P0DP24 149 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 CALM3P0DP25 149 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 GFAPP14136 432 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 ATF6P18850 670 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 UGT2B10P36537 528 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 MAGEA6P43360 314 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 HCAR3P49019 387 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 PRLHRP49683 370 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 UBE2E1P51965 193 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 ZNF138P52744 262 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 PLTPP55058 493 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 RPL31P62899 125 aaKnown RBP2.08□□□□□ -2.08
UBR1-205ENST00000564540 DYNC1I2Q13409 638 aaKnown RBP2.08□□□□□ -2.08
UBR1-205ENST00000564540 TFDP2Q14188 446 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 GCSAMLQ5JQS6 135 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 SPIN3Q5JUX0 258 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 ACTL10Q5JWF8 245 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 CPTPQ5TA50 214 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 NPSR1Q6W5P4 371 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 TEX43Q6ZNM6 134 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 OAFQ86UD1 273 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 CALHM1Q8IU99 346 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 OR51A7Q8NH64 312 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 TNFRSF14Q92956 283 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 TMEM230Q96A57 120 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 UBE2E2Q96LR5 201 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 SERPINB11Q96P15 392 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 CALN1Q9BXU9 219 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 HDHD2Q9H0R4 259 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 SAV1Q9H4B6 383 aaPredicted RBP2.08□□□□□ -2.08
UBR1-205ENST00000564540 PLEKHA1Q9HB21 404 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 SLC39A1Q9NY26 324 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 MAT2BQ9NZL9 334 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 UVRAGQ9P2Y5 699 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 CYB5R1Q9UHQ9 305 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 PPIL1Q9Y3C6 166 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 HYOU1Q9Y4L1 999 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 KCNE3Q9Y6H6 103 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 URGCP-MRPS24S4R325 110 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 MYO3BQ8WXR4 1341 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 MAPK8IP3Q9UPT6 1336 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 OTOGLQ3ZCN5 2332 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 NID2Q14112 1375 aa2.08□□□□□ -2.08
UBR1-205ENST00000564540 DENND4AQ7Z401 1863 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 A0A0U1RQV1 116 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 C1orf232A0A0U1RR37 186 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 ANKRD20A5PA0PJZ0 165 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 SEC14L6B5MCN3 397 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 ANKRD65E5RJM6 399 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 M0QXV9 152 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 DFFAO00273 331 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 ITGB1BP1O14713 200 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 SLC16A7O60669 478 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 LDOC1O95751 146 aaPredicted RBP2.07□□□□□ -2.08
UBR1-205ENST00000564540 EIF4EP06730 217 aaKnown RBP2.07□□□□□ -2.08
UBR1-205ENST00000564540 RD3LP0DJH9 198 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 OR5H8P0DN80 308 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 TCP1P17987 556 aaKnown RBP2.07□□□□□ -2.08
UBR1-205ENST00000564540 RAB5AP20339 215 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 CD40LGP29965 261 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 GNRHRP30968 328 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 DNASE1L1P49184 302 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 HCCSP53701 268 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 ZNF121P58317 390 aaPredicted RBP2.07□□□□□ -2.08
UBR1-205ENST00000564540 TAS2R39P59534 338 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 MYL6P60660 151 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 UBE2IP63279 158 aaKnown RBP2.07□□□□□ -2.08
UBR1-205ENST00000564540 IFFO1Q0D2I5 559 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 TCP10Q12799 353 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 MAPRE2Q15555 327 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 ANKRD22Q5VYY1 191 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 RWDD4Q6NW29 188 aaKnown RBP2.07□□□□□ -2.08
UBR1-205ENST00000564540 ZFP1Q6P2D0 407 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 ARL9Q6T311 187 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 PLET1Q6UQ28 207 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 FAM19A1Q7Z5A9 133 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 SETD3Q86TU7 594 aaPredicted RBP2.07□□□□□ -2.08
UBR1-205ENST00000564540 TMEM25Q86YD3 366 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 NKAIN4Q8IVV8 208 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 BOD1L2Q8IYS8 172 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 FAM71AQ8IYT1 594 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 NPWQ8N729 165 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 LRRC52Q8N7C0 313 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 OR10AD1Q8NGE0 317 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 OR10W1Q8NGF6 305 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 OR6K2Q8NGY2 324 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 OR10J6PQ8NGY7 276 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 LINC01560Q8TB33 94 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 CIRBP-AS1Q8TBR5 109 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 RTN4IP1Q8WWV3 396 aaPredicted RBP2.07□□□□□ -2.08
UBR1-205ENST00000564540 SGTBQ96EQ0 304 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 C8orf76Q96K31 380 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 RNF145Q96MT1 663 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 PARP12Q9H0J9 701 aaKnown RBP2.07□□□□□ -2.08
UBR1-205ENST00000564540 REEP1Q9H902 201 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 CES1P1Q9UKY3 287 aa2.07□□□□□ -2.08
UBR1-205ENST00000564540 KLF12Q9Y4X4 402 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms