RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 SELLP14151 372 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 MMP9P14780 707 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 CFPP27918 469 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 COMPP49747 757 aaPredicted RBP16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 FAM76BQ5HYJ3 339 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 RUSC1-AS1Q66K80 236 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 STUMQ69YW2 141 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 SSX6Q7RTT6 188 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 THAP5Q7Z6K1 395 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 OR5T2Q8NGG2 359 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 OR10Z1Q8NGY1 313 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 HIST1H2AAQ96QV6 131 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 TBX15Q96SF7 602 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 MNTQ99583 582 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 OSBPL10Q9BXB5 764 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 HAO2Q9NYQ3 351 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 DNAJB11Q9UBS4 358 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 MRM2Q9UI43 246 aaKnown RBP16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 PIGLQ9Y2B2 252 aa16.53■□□□□ 0.24
SHCBP1-203ENST00000564272 ZNF732B4DXR9 585 aa16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 LOC110117498-PIK3R3F6TDL0 507 aa16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 RHBDL1O75783 438 aa16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 TOX4O94842 621 aa16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 AMY2BP19961 511 aa16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 PRTN3P24158 256 aa16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 MTNR1AP48039 350 aa16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 RIPPLY1Q0D2K3 151 aa16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 IKZF1Q13422 519 aa16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 KPNB1Q14974 876 aaKnown RBP16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 BCL2L15Q5TBC7 163 aa16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 KRT74Q7RTS7 529 aa16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 PNLDC1Q8NA58 520 aaKnown RBP16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 C12orf43Q96C57 262 aaKnown RBP16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 RAB3IPQ96QF0 476 aaPredicted RBP16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 RBM4BQ9BQ04 359 aaKnown RBP16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 MOB1AQ9H8S9 216 aa16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 WARS2Q9UGM6 360 aaKnown RBP16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 R4GMQ9 66 aa16.52■□□□□ 0.24
SHCBP1-203ENST00000564272 DHRS3O75911 302 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 LIPFP07098 398 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 ATP6V1B1P15313 513 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 ACTR3P61158 418 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 GNG3P63215 75 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 EGR3Q06889 387 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 DEFB112Q30KQ8 113 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 CEACAM21Q3KPI0 293 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 GPR157Q5UAW9 335 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 METTL11BQ5VVY1 283 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 PLCXD3Q63HM9 321 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 CCDC121Q6ZUS5 278 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 MOB3CQ70IA8 216 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 SLC36A1Q7Z2H8 476 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 WDFY2Q96P53 400 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 SIRPDQ9H106 197 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 OR51I2Q9H344 312 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 ENPP5Q9UJA9 477 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 RPUSD1Q9UJJ7 312 aaKnown RBP16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 OR52A1Q9UKL2 312 aa16.51■□□□□ 0.23
SHCBP1-203ENST00000564272 H3BNX3 289 aa16.5■□□□□ 0.23
SHCBP1-203ENST00000564272 P2RY10O00398 339 aa16.5■□□□□ 0.23
SHCBP1-203ENST00000564272 RPP14O95059 124 aaKnown RBP16.5■□□□□ 0.23
SHCBP1-203ENST00000564272 ECDO95905 644 aaPredicted RBP16.5■□□□□ 0.23
SHCBP1-203ENST00000564272 HTR1FP30939 366 aa16.5■□□□□ 0.23
SHCBP1-203ENST00000564272 ARF6P62330 175 aa16.5■□□□□ 0.23
SHCBP1-203ENST00000564272 SLC9A3R2Q15599 337 aa16.5■□□□□ 0.23
SHCBP1-203ENST00000564272 ELMOD2Q8IZ81 293 aa16.5■□□□□ 0.23
SHCBP1-203ENST00000564272 ZMAT3Q9HA38 289 aaKnown RBP16.5■□□□□ 0.23
SHCBP1-203ENST00000564272 SLC22A13Q9Y226 551 aa16.5■□□□□ 0.23
SHCBP1-203ENST00000564272 A0A1W2PQL4 384 aaPredicted RBP16.49■□□□□ 0.23
SHCBP1-203ENST00000564272 NKX6-3A6NJ46 265 aa16.49■□□□□ 0.23
SHCBP1-203ENST00000564272 EI24O14681 340 aa16.49■□□□□ 0.23
SHCBP1-203ENST00000564272 NDUFB3O43676 98 aa16.49■□□□□ 0.23
SHCBP1-203ENST00000564272 TGM4P49221 684 aa16.49■□□□□ 0.23
SHCBP1-203ENST00000564272 AWAT1Q58HT5 328 aa16.49■□□□□ 0.23
SHCBP1-203ENST00000564272 ZBTB37Q5TC79 503 aa16.49■□□□□ 0.23
SHCBP1-203ENST00000564272 YIPF7Q8N8F6 280 aa16.49■□□□□ 0.23
SHCBP1-203ENST00000564272 OR10H4Q8NGA5 316 aa16.49■□□□□ 0.23
SHCBP1-203ENST00000564272 OR8J1Q8NGP2 316 aa16.49■□□□□ 0.23
SHCBP1-203ENST00000564272 GAFA1Q96PS6 74 aa16.49■□□□□ 0.23
SHCBP1-203ENST00000564272 NLKQ9UBE8 527 aa16.49■□□□□ 0.23
SHCBP1-203ENST00000564272 SNX5Q9Y5X3 404 aa16.49■□□□□ 0.23
SHCBP1-203ENST00000564272 CENPVL3A0A0U1RRI6 287 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 A0A1B0GTI1 187 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 OR5B21A6NL26 309 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 MTRF1O75570 445 aaKnown RBP16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 NRASP01111 189 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 ALPLP05186 524 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 KRT8P05787 483 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 RNASE1P07998 156 aaKnown RBP16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 GLRA1P23415 457 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 CDC42P60953 191 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 ODF4Q2M2E3 257 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 C11orf91Q3C1V1 193 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 ATPAF1Q5TC12 328 aaPredicted RBP16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 HAGHLQ6PII5 290 aaPredicted RBP16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 C3orf56Q8N813 242 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 OR5A2Q8NGI9 324 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 ANGPTL6Q8NI99 470 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 AQP3Q92482 292 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 TAF15Q92804 592 aaKnown RBP eCLIP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms