RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 ANKHD1Q8IWZ3 2542 aaKnown RBP10.96□□□□□ -0.66
CLK3-214ENST00000564096 PCNX1Q96RV3 2341 aa10.96□□□□□ -0.66
CLK3-214ENST00000564096 SETXQ7Z333 2677 aaKnown RBP10.95□□□□□ -0.66
CLK3-214ENST00000564096 A0A075B6Q4 140 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 CLEC18AA5D8T8 446 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 A6NNC1 897 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 B9A039 149 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 M0R233 179 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 SIAH2O43255 324 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 CLPXO76031 633 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 CYB5AP00167 134 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 UBBP0CG47 229 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 COX6B1P14854 86 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 S100A5P33763 92 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 CAV3P56539 151 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 KISS1Q15726 138 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 EFNB3Q15768 340 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 HES5Q5TA89 166 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 CLEC18BQ6UXF7 455 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 NR2C2APQ86WQ0 139 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 ZNF573Q86YE8 665 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 ACBD4Q8NC06 268 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 CLEC18CQ8NCF0 446 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 TNFAIP8L1Q8WVP5 186 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 OR5P3Q8WZ94 311 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 HS3ST6Q96QI5 342 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 CXXC4Q9H2H0 198 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 MMP27Q9H306 513 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 LIN7BQ9HAP6 207 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 SMURF1Q9HCE7 757 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 GHRLQ9UBU3 117 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 ETV7Q9Y603 341 aa10.95□□□□□ -0.66
CLK3-214ENST00000564096 PQLC2LA1A4F0 135 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 LRP5LA4QPB2 252 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 E7EQL1 145 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 BPNT1O95861 308 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 CALCBP10092 127 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 BMP4P12644 408 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 LOXP28300 417 aaPredicted RBP10.94□□□□□ -0.66
CLK3-214ENST00000564096 POU3F4P49335 361 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 ZNF81P51508 661 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 GPM6AP51674 278 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 C1orf100Q5SVJ3 147 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 MUC15Q8N387 334 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 OR10AD1Q8NGE0 317 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 DVL3Q92997 716 aaPredicted RBP10.94□□□□□ -0.66
CLK3-214ENST00000564096 ELMOD3Q96FG2 381 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 RNF170Q96K19 258 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 CEP19Q96LK0 163 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 GFI1Q99684 422 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 BARHL1Q9BZE3 327 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 CST11Q9H112 138 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 CNTD2Q9H8S5 307 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 PCDHB16Q9NRJ7 776 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 PLEKHB1Q9UF11 243 aaPredicted RBP10.94□□□□□ -0.66
CLK3-214ENST00000564096 ZDHHC8Q9ULC8 765 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 MRPS28Q9Y2Q9 187 aaKnown RBP10.94□□□□□ -0.66
CLK3-214ENST00000564096 POLDIP2Q9Y2S7 368 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 PEX16Q9Y5Y5 336 aa10.94□□□□□ -0.66
CLK3-214ENST00000564096 DOPEY1Q5JWR5 2465 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 HCFC1P51610 2035 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 LOC100289279A0A1B0GTE1 492 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 A0A1B0GWJ7 208 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 ZSCAN5BA6NJL1 495 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 ZNF732B4DXR9 585 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 J3QT63 122 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 HS3ST1O14792 307 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 RGS5O15539 181 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 LILRA1O75019 489 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 ZNF780AO75290 641 aaPredicted RBP10.93□□□□□ -0.66
CLK3-214ENST00000564096 ARSBP15848 533 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 HAAOP46952 286 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 SRP9P49458 86 aaKnown RBP10.93□□□□□ -0.66
CLK3-214ENST00000564096 MMP15P51511 669 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 SRSF1Q07955 248 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLK3-214ENST00000564096 FAM189A2Q15884 450 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 MSMPQ1L6U9 139 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 ALKBH6Q3KRA9 238 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 LINC00299Q6ZSB3 139 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 LRP11Q86VZ4 500 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 OR2Z1Q8NG97 314 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 TBC1D15Q8TC07 691 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 LGALS14Q8TCE9 139 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 SPACA5Q96QH8 159 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 PKIBQ9C010 78 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 NXF2Q9GZY0 626 aaKnown RBP10.93□□□□□ -0.66
CLK3-214ENST00000564096 MSL2Q9HCI7 577 aa10.93□□□□□ -0.66
CLK3-214ENST00000564096 MYEF2Q9P2K5 600 aaKnown RBP10.93□□□□□ -0.66
CLK3-214ENST00000564096 A1L4Q6 167 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 MLNRO43193 412 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 PLAUP00749 431 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 TMEM225BP0DP42 221 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 SLC2A2P11168 524 aaPredicted RBP10.92□□□□□ -0.66
CLK3-214ENST00000564096 TALDO1P37837 337 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 CD200P41217 278 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 PTGFRP43088 359 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 ALDH3B1P43353 468 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 OR3A4PP47883 348 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 GPR176Q14439 515 aa10.92□□□□□ -0.66
CLK3-214ENST00000564096 P2RY14Q15391 338 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms