RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 KRT77Q7Z794 578 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 ZDHHC23Q8IYP9 409 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 Q8N7P7 452 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 PIGCQ92535 297 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 TNFRSF14Q92956 283 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 GAFA1Q96PS6 74 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 TEAD3Q99594 435 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 CITED1Q99966 193 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 OR51I2Q9H344 312 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 TNFRSF19Q9NS68 423 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 LAMP5Q9UJQ1 280 aa14.15□□□□□ -0.14
VPS9D1-203ENST00000563798 ZNF816-ZNF321PA0A0X1KG74 233 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 SIGLEC5O15389 551 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 GPR137BO60478 399 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 ZNF254O75437 659 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 IGHV4-59P01825 116 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 ACAA1P09110 424 aaPredicted RBP14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 CRISP1P54107 249 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 CAV3P56539 151 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 GNG3P63215 75 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 CBX1P83916 185 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 APOFQ13790 326 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 CEACAM21Q3KPI0 293 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 ZBTB37Q5TC79 503 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 TMEM236Q5W0B7 351 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 FAHD1Q6P587 224 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 OR5T2Q8NGG2 359 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 HIST1H2AAQ96QV6 131 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 DPAGT1Q9H3H5 408 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 ONECUT1Q9UBC0 465 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 DNAJB11Q9UBS4 358 aa14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 CAB39Q9Y376 341 aaPredicted RBP14.14□□□□□ -0.15
VPS9D1-203ENST00000563798 TMEM269A0A1B0GVZ9 245 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 CCDC182A6NF36 153 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 NKX6-3A6NJ46 265 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 RNASEK-C17orf49H0YIS7 233 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 M0R1W7 72 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 GYG2O15488 501 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 HCCSP53701 268 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 RPS7P62081 194 aaKnown RBP14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 IKZF1Q13422 519 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 SNAPC1Q16533 368 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 DGUOKQ16854 277 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 C17orf107Q6ZR85 190 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 SPATA24Q86W54 205 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 ZNF679Q8IYX0 411 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 OR5A2Q8NGI9 324 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 ASB17Q8WXJ9 295 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 LRTOMTQ8WZ04 291 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 SLC7A6OSQ96CW6 309 aaPredicted RBP14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 MROQ9BYG7 248 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 SNTG1Q9NSN8 517 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 NLKQ9UBE8 527 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 SLC25A10Q9UBX3 287 aaPredicted RBP14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 ZNF222Q9UK12 451 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 POMPQ9Y244 141 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 TMEM14AQ9Y6G1 99 aa14.13□□□□□ -0.15
VPS9D1-203ENST00000563798 OR5B21A6NL26 309 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 OR2AT4A6NND4 320 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 KCNAB3O43448 404 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 AKR7A2O43488 359 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 CLPXO76031 633 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 FBP1P09467 338 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 SELLP14151 372 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 GPM6AP51674 278 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 EFNB1P98172 346 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 LCN1P1Q5VSP4 162 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 GDPGP1Q6ZNW5 385 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 KCTD8Q6ZWB6 473 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 ZSCAN4Q8NAM6 433 aaPredicted RBP14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 LINC01006Q8NI28 216 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 ZNF671Q8TAW3 534 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 UTP4Q969X6 686 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 OR8B4Q96RC9 309 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 PBOV1Q9GZY1 135 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 PAPOLBQ9NRJ5 636 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 TVP23BQ9NYZ1 205 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 ZNRD1Q9P1U0 126 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 NUFIP1Q9UHK0 495 aaKnown RBP14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 FAM96BQ9Y3D0 163 aa14.12□□□□□ -0.15
VPS9D1-203ENST00000563798 IGKV1D-17A0A075B6S4 117 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 PRR32B1ATL7 298 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 ZNF732B4DXR9 585 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 SRSF10O75494 262 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 RHBDL1O75783 438 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 GLRA1P23415 457 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 EEF1B2P24534 225 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 UBE2E1P51965 193 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 PROK1P58294 105 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 ESRRGP62508 458 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 SRSF4Q08170 494 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 RIPPLY1Q0D2K3 151 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 PTGES3Q15185 160 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 TAF9Q16594 264 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 NCR3LG1Q68D85 454 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 PDZD9Q8IXQ8 264 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 FAM81AQ8TBF8 368 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 AQP3Q92482 292 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 SDSLQ96GA7 329 aa14.11□□□□□ -0.15
VPS9D1-203ENST00000563798 C16orf95Q9H693 158 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms