RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ZNF57Q68EA5 555 aaPredicted RBP4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 FAM45BPQ6NSW5 357 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 PIM3Q86V86 326 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 CCDC71Q8IV32 467 aaPredicted RBP4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 GID4Q8IVV7 300 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 CTAGE3PQ8IX95 158 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 KIR2DL5AQ8N109 375 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 RIBC1Q8N443 379 aaPredicted RBP4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 NANOGP1Q8N7R0 232 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 OR4C6Q8NH72 309 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 OR56B4Q8NH76 319 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 OR2T6Q8NHC8 308 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 KIR2DL5BQ8NHK3 375 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 SPATA3Q8NHX4 192 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 FAM45AQ8TCE6 357 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 EEF1AKMT3Q96AZ1 226 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 TRIB3Q96RU7 358 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 NUDT9Q9BW91 350 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 HES7Q9BYE0 225 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 PPDPFQ9H3Y8 114 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 POPDC3Q9HBV1 291 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 ZBTB20Q9HC78 741 aaPredicted RBP4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 ABCB9Q9NP78 766 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 TIGARQ9NQ88 270 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 NDE1Q9NXR1 346 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 TAS2R7Q9NYW3 318 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 KLK11Q9UBX7 282 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 SLC2A6Q9UGQ3 507 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 SPATA2Q9UM82 520 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 ING4Q9UNL4 249 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 RPL36Q9Y3U8 105 aaKnown RBP4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 ATG2AQ2TAZ0 1938 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 NUP205Q92621 2012 aa4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 MYO18AQ92614 2054 aaKnown RBP4.27□□□□□ -1.73
VPS35P1-201ENST00000563400 IGLV5-45A0A087WSX0 123 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 A0A0B4J2E0 115 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 A0A1B0GX12 115 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 RNF212BA8MTL3 300 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 G3V3Y1 287 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 M0R036 132 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 SULT2B1O00204 365 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 CCRL2O00421 344 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 SURF4O15260 269 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 HPGDSO60760 199 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 TECTAO75443 2155 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 POP7O75817 140 aaKnown RBP4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 RAB36O95755 333 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 SLPIP03973 132 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 CD74P04233 296 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 C8GP07360 202 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 RBP1P09455 135 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 GNAO1P09471 354 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 OR9G9P0C7N8 305 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 LIFP15018 202 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 IGFBP3P17936 291 aaPredicted RBP4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 TAC1P20366 129 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 IL12AP29459 219 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 HTR1FP30939 366 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 SHMT2P34897 504 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 CAV2P51636 162 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 AP1S2P56377 157 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 CCL7P80098 99 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 ACVR1Q04771 509 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 UNC119Q13432 240 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 KCNJ11Q14654 390 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 GUSBP1Q15486 140 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 SLC9A3R2Q15599 337 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 LPAL2Q16609 132 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 GUK1Q16774 197 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 CCNJQ5T5M9 372 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 CPTPQ5TA50 214 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 FHL5Q5TD97 284 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 CASP12Q6UXS9 341 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 CCDC121Q6ZUS5 278 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 PUSL1Q8N0Z8 303 aaKnown RBP4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 DEFB119Q8N690 84 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 OR4D10Q8NGI6 311 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 OR5AR1Q8NGP9 310 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 FNDC8Q8TC99 324 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 RNF138Q8WVD3 245 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 PCNPQ8WW12 178 aaKnown RBP4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 TCTEX1D2Q8WW35 142 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 IL1F10Q8WWZ1 152 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 POM121L2Q96KW2 1035 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 BMFQ96LC9 184 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 ALKBH3Q96Q83 286 aaPredicted RBP4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 GPR22Q99680 433 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 IL1RAPQ9NPH3 570 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 FGFR1OP2Q9NVK5 253 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 ASF1AQ9Y294 204 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 ARL5AQ9Y689 179 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 CACNG2Q9Y698 323 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 MYOFQ9NZM1 2061 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 CHD9Q3L8U1 2897 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 TRBV5-4A0A0C4DH59 114 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 KIR2DS1A0A191URI9 304 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 EXOC1LA0A1B0GW35 172 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 FUOMA2VDF0 154 aa4.26□□□□□ -1.73
VPS35P1-201ENST00000563400 OR2AT4A6NND4 320 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms