RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 RPL23P62829 140 aaKnown RBP3.74□□□□□ -1.81
SMG1-204ENST00000561940 CDK5Q00535 292 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 FER1L6Q2WGJ9 1857 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 TCEAL5Q5H9L2 206 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 NANOGP8Q6NSW7 305 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 CALHM1Q8IU99 346 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 OR4K5Q8NGD3 323 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 PIH1D2Q8WWB5 315 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 TCEAL3Q969E4 200 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 ISOC2Q96AB3 205 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 CSPG4P5Q96PW8 444 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 TRPM7Q96QT4 1865 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 CALN1Q9BXU9 219 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 TMEM27Q9HBJ8 222 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 RGS18Q9NS28 235 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 ZMAT5Q9UDW3 170 aaKnown RBP3.74□□□□□ -1.81
SMG1-204ENST00000561940 NCOR1O75376 2440 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 RTL1A6NKG5 1358 aa3.74□□□□□ -1.81
SMG1-204ENST00000561940 IGHV1OR15-9A0A0B4J2B8 117 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 IGHV1-69DA0A0B4J2H0 117 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 C5orf63A6NC05 138 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 PDZK1P1A8MUH7 402 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 SERPINE3A8MV23 424 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 RBFOX2O43251 390 aaKnown RBP eCLIP3.73□□□□□ -1.81
SMG1-204ENST00000561940 REM1O75628 298 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 SEMA3DO95025 777 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 YIF1AO95070 293 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 FARS2O95363 451 aaKnown RBP3.73□□□□□ -1.81
SMG1-204ENST00000561940 APCSP02743 223 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 MRPL3P09001 348 aaKnown RBP3.73□□□□□ -1.81
SMG1-204ENST00000561940 OR56A5P0C7T3 313 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 GABRR2P28476 465 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 PFN2P35080 140 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 PPICP45877 212 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 LCN2P80188 198 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 CYP24A1Q07973 514 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 WDR82Q6UXN9 313 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 MRPL21Q7Z2W9 205 aaKnown RBP3.73□□□□□ -1.81
SMG1-204ENST00000561940 SNX20Q7Z614 316 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 UNC93AQ86WB7 457 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 CDKL3Q8IVW4 592 aaPredicted RBP3.73□□□□□ -1.81
SMG1-204ENST00000561940 KIF2BQ8N4N8 673 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 OR52P1PQ8NH57 321 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 HSD17B10Q99714 261 aaKnown RBP3.73□□□□□ -1.81
SMG1-204ENST00000561940 DEFB129Q9H1M3 183 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 FBXO44Q9H4M3 255 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 TMEM14AQ9Y6G1 99 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 RGPD5Q99666 1765 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 KIF24Q5T7B8 1368 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 RAB3GAP2Q9H2M9 1393 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 CCDC88AQ3V6T2 1871 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 MRC1P22897 1456 aa3.73□□□□□ -1.81
SMG1-204ENST00000561940 VCANP13611 3396 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 ADGRA3Q8IWK6 1321 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 LOC100653049A0A140TA62 436 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 RSPH10B2B2RC85 870 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 B4GALT5O43286 388 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 SLC16A7O60669 478 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 KRT34O76011 436 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 CATP04040 527 aaKnown RBP3.72□□□□□ -1.81
SMG1-204ENST00000561940 RSPH10BP0C881 870 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 PMCHP20382 165 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 CFHR2P36980 270 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 GFERP55789 205 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 ZNF829Q3KNS6 432 aaPredicted RBP3.72□□□□□ -1.81
SMG1-204ENST00000561940 IGFL3Q6UXB1 125 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
SMG1-204ENST00000561940 ITFG1Q8TB96 612 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 FRZBQ92765 325 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 SCGB3A2Q96PL1 93 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 FGF23Q9GZV9 251 aaPredicted RBP3.72□□□□□ -1.81
SMG1-204ENST00000561940 IL22Q9GZX6 179 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 CD209Q9NNX6 404 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 RRAGDQ9NQL2 400 aaPredicted RBP3.72□□□□□ -1.81
SMG1-204ENST00000561940 SIRT7Q9NRC8 400 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 DDX19AQ9NUU7 478 aaKnown RBP3.72□□□□□ -1.81
SMG1-204ENST00000561940 HYOU1Q9Y4L1 999 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 NOTCH2Q04721 2471 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 A0A1W2PP64 1363 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 AKAP11Q9UKA4 1901 aa3.72□□□□□ -1.81
SMG1-204ENST00000561940 ZNF831Q5JPB2 1677 aa3.71□□□□□ -1.81
SMG1-204ENST00000561940 RBBP6Q7Z6E9 1792 aaKnown RBP3.71□□□□□ -1.81
SMG1-204ENST00000561940 ZNF609O15014 1411 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 ARPC4-TTLL3A0A0A6YYG9 625 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 TRAV19A0A0A6YYK7 116 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 IGHV3OR16-9A0A0B4J2B5 98 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 KRBOX1C9JBD0 128 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 NDUFC2-KCTD14E9PQ53 114 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 SOCS1O15524 211 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 HSBP1O75506 76 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 TACSTD2P09758 323 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 CCL5P13501 91 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 GGT2P36268 569 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 PSMD4P55036 377 aaKnown RBP3.71□□□□□ -1.82
SMG1-204ENST00000561940 MPV17L2Q567V2 206 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 FBXW9Q5XUX1 488 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 FAM71E1Q6IPT2 247 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 LINC00336Q6ZUF6 198 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 SLC16A13Q7RTY0 426 aa3.71□□□□□ -1.82
SMG1-204ENST00000561940 LINC00523Q86TU6 105 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms