RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 NDEL1Q9GZM8 345 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 TMEM38AQ9H6F2 299 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 KAT8Q9H7Z6 458 aaKnown RBP7.57□□□□□ -1.2
HERC1-210ENST00000560897 LIN7BQ9HAP6 207 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 SRA1Q9HD15 236 aaKnown RBP7.57□□□□□ -1.2
HERC1-210ENST00000560897 VNN3Q9NY84 501 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 BAG5Q9UL15 447 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 COA3Q9Y2R0 106 aaPredicted RBP7.57□□□□□ -1.2
HERC1-210ENST00000560897 LRP12Q9Y561 859 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 HILPDAQ9Y5L2 63 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 KIAA1109Q2LD37 5005 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 IGLV1-36A0A0B4J1U3 117 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 FAM220BPB1ANY3 271 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.56□□□□□ -1.2
HERC1-210ENST00000560897 M0QX08 132 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 CDIPTO14735 213 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 AHCYL1O43865 530 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 SLC16A7O60669 478 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 ACAA1P09110 424 aaPredicted RBP7.56□□□□□ -1.2
HERC1-210ENST00000560897 OR3A4PP47883 348 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 INSL3P51460 131 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 ARHGDIBP52566 201 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 RPL31P62899 125 aaKnown RBP7.56□□□□□ -1.2
HERC1-210ENST00000560897 SLC35B1P78383 322 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 TRAP1Q12931 704 aaKnown RBP7.56□□□□□ -1.2
HERC1-210ENST00000560897 IL18R1Q13478 541 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 SEC23BQ15437 767 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 DUSP7Q16829 419 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 GLYATQ6IB77 296 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 MSRB3Q8IXL7 192 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 MICU2Q8IYU8 434 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 C11orf42Q8N5U0 333 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 RNF148Q8N7C7 305 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 OR56B2PQ8NGI1 322 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 OR4Q3Q8NH05 313 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 NDNFQ8TB73 568 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 RAX2Q96IS3 184 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 ZNF570Q96NI8 536 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 RAB3IPQ96QF0 476 aaPredicted RBP7.56□□□□□ -1.2
HERC1-210ENST00000560897 ATF6BQ99941 703 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 PRSS27Q9BQR3 290 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 SPATA25Q9BR10 227 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 SLC25A33Q9BSK2 321 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 CMTM6Q9NX76 183 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 TAS2R1Q9NYW7 299 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 SCOCQ9UIL1 159 aa7.56□□□□□ -1.2
HERC1-210ENST00000560897 SIRT4Q9Y6E7 314 aaPredicted RBP7.56□□□□□ -1.2
HERC1-210ENST00000560897 PRSS37A4D1T9 235 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 M0R135 149 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 CXCR6O00574 342 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 ZNF682O95780 498 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 TFF1P04155 84 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 HCKP08631 526 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 ENTPD1P49961 510 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 ZNF92Q03936 586 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 ZSCAN26Q16670 478 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 LRRC23Q53EV4 343 aaPredicted RBP7.55□□□□□ -1.2
HERC1-210ENST00000560897 CORO6Q6QEF8 472 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 DHFR2Q86XF0 187 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 NKAIN4Q8IVV8 208 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 C11orf53Q8IXP5 236 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 COMMD1Q8N668 190 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 OR10Z1Q8NGY1 313 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 OR51A7Q8NH64 312 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 OR2AE1Q8NHA4 323 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 ANGPTL6Q8NI99 470 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 CHPT1Q8WUD6 406 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 STMN2Q93045 179 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 SPTSSAQ969W0 71 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 ZNF799Q96GE5 643 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 TPD52L3Q96J77 140 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 NSMCE2Q96MF7 247 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 WDR13Q9H1Z4 485 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 SYT4Q9H2B2 425 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 OPA3Q9H6K4 179 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 C19orf12Q9NSK7 152 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 NLKQ9UBE8 527 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 MAGEL2Q9UJ55 1249 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 FAM32AQ9Y421 112 aaKnown RBP7.55□□□□□ -1.2
HERC1-210ENST00000560897 GMEB1Q9Y692 573 aa7.55□□□□□ -1.2
HERC1-210ENST00000560897 TRAV27A0A087WT01 109 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 TRBV5-3A0A0A0MS03 114 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 ERICH4A6NGS2 130 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 SH2D7A6NKC9 451 aaPredicted RBP7.54□□□□□ -1.2
HERC1-210ENST00000560897 ANXA2P2A6NMY6 339 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 OR2AT4A6NND4 320 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 ODF3BA8MYP8 253 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 M0QZK8 103 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 NME4O00746 187 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 GSC2O15499 205 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 SNRNP70P08621 437 aaKnown RBP7.54□□□□□ -1.2
HERC1-210ENST00000560897 T-ENOLP0DO92 83 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 IFI30P13284 250 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 BRS3P32247 399 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 KDELR2P33947 212 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 ANKDD1AQ495B1 522 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 MESTQ5EB52 335 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 ZNF626Q68DY1 528 aa7.54□□□□□ -1.2
HERC1-210ENST00000560897 ZNF770Q6IQ21 691 aaPredicted RBP7.54□□□□□ -1.2
HERC1-210ENST00000560897 DNM1P34Q6PK57 102 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms