RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 CYB5AP00167 134 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 THBDP07204 575 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 UBBP0CG47 229 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 RNF224P0DH78 156 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 PRF1P14222 555 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 ZNF250P15622 560 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 ARSBP15848 533 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 ADRA2CP18825 462 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 KITLGP21583 273 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 AZGP1P25311 298 aaKnown RBP5.52□□□□□ -1.53
SPG11-221ENST00000560299 CFPP27918 469 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 HTR2CP28335 458 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 SSTR2P30874 369 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 KIR2DL3P43628 341 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 FABP6P51161 128 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 BMXP51813 675 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 CAV3P56539 151 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 KLF3P57682 345 aaPredicted RBP5.52□□□□□ -1.53
SPG11-221ENST00000560299 OR10A3P58181 314 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 BSPH1Q075Z2 132 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 PSG7Q13046 419 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 PRDX4Q13162 271 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 LSAMPQ13449 338 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 GPR176Q14439 515 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 KISS1Q15726 138 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 CEACAM21Q3KPI0 293 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 C1orf100Q5SVJ3 147 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 SPATA46Q5T0L3 261 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 NCMAPQ5T1S8 102 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 HES5Q5TA89 166 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 TMEM42Q69YG0 159 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 OR2T2Q6IF00 324 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 KRT74Q7RTS7 529 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 ZDHHC23Q8IYP9 409 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 BHLHE23Q8NDY6 225 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 OR8G5Q8NG78 346 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 OR5A2Q8NGI9 324 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 OR13G1Q8NGZ3 307 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 OR8S1Q8NH09 359 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 HPS1Q92902 700 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 RTL8AQ9BWD3 113 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 LIN7BQ9HAP6 207 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 SMURF1Q9HCE7 757 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 HMG20AQ9NP66 347 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 GPR173Q9NS66 373 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 CYSLTR2Q9NS75 346 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 TMEM100Q9NV29 134 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 C14orf119Q9NWQ9 140 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 RABL2AQ9UBK7 228 aaPredicted RBP5.52□□□□□ -1.53
SPG11-221ENST00000560299 CGGBP1Q9UFW8 167 aaPredicted RBP5.52□□□□□ -1.53
SPG11-221ENST00000560299 DUSP13Q9UII6 198 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 PURGQ9UJV8 347 aaKnown RBP5.52□□□□□ -1.53
SPG11-221ENST00000560299 SPATA2Q9UM82 520 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 RABL2BQ9UNT1 228 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 RHBDD3Q9Y3P4 386 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 ETV7Q9Y603 341 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 HCFC1P51610 2035 aa5.52□□□□□ -1.53
SPG11-221ENST00000560299 CADP27708 2225 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 A0A0G2JK05 382 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 LOC100289279A0A1B0GTE1 492 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 FAM230AA0A1W2PPH8 454 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 METTL21EPA6NDL7 271 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 DPRXA6NFQ7 191 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 CLDN25C9JDP6 229 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 ZNF780AO75290 641 aaPredicted RBP5.51□□□□□ -1.53
SPG11-221ENST00000560299 SCGNO76038 276 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 KDM4BO94953 1096 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 BPNT1O95861 308 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 IGHV3-13P01766 116 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 APOA1P02647 267 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 TMEM225BP0DP42 221 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 CD37P11049 281 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 SLC2A2P11168 524 aaPredicted RBP5.51□□□□□ -1.53
SPG11-221ENST00000560299 TNFSF4P23510 183 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 PTBP1P26599 531 aaKnown RBP eCLIP5.51□□□□□ -1.53
SPG11-221ENST00000560299 PTGFRP43088 359 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 EVX1P49640 407 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 ART1P52961 327 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 ERVS71-1P61550 626 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 GNG3P63215 75 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 NKX6-1P78426 367 aaPredicted RBP5.51□□□□□ -1.53
SPG11-221ENST00000560299 ZNF45Q02386 682 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 TNK1Q13470 666 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 OR8G1Q15617 311 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 UBE2V2Q15819 145 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 SP5Q6BEB4 398 aaPredicted RBP5.51□□□□□ -1.53
SPG11-221ENST00000560299 AWAT2Q6E213 333 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 VHLLQ6RSH7 139 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 BAIAP2L2Q6UXY1 529 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 NR2C2APQ86WQ0 139 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 LRRC28Q86X40 367 aaPredicted RBP5.51□□□□□ -1.53
SPG11-221ENST00000560299 ANGPTL5Q86XS5 388 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 ZNF573Q86YE8 665 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 MKXQ8IYA7 352 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 OR5AS1Q8N127 324 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 SAMD12Q8N8I0 201 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 OR52N4Q8NGI2 321 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 OR51A2Q8NGJ7 313 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 OR6Q1Q8NGQ2 317 aa5.51□□□□□ -1.53
SPG11-221ENST00000560299 KCNG3Q8TAE7 436 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms