RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 LGALS7P47929 136 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 GPNMBQ14956 572 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 NKAIN2Q5VXU1 208 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 SLC36A1Q7Z2H8 476 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 MIA3Q5JRA6 1907 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 M0R296 226 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 SRP14P37108 136 aaKnown RBP12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 ZDHHC22Q8N966 263 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 SMIM19Q96E16 107 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 Q96M85 177 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 OTOFQ9HC10 1997 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 ZNF815PA8K554 130 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 LBX1P52954 281 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 LYZP61626 148 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 PPIAP62937 165 aaKnown RBP12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 DUSP21Q9H596 190 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 FOXJ3Q9UPW0 622 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 TLCD2A6NGC4 264 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 SLURP2P0DP57 97 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 PRSS21Q9Y6M0 314 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 PCM1Q15154 2024 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 MASP2O00187 686 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 T-ENOLP0DO92 83 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 ZNF26P17031 533 aaPredicted RBP12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 FPR2P25090 351 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 MDH2P40926 338 aaKnown RBP12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 ANKRD55Q3KP44 614 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 SYT14P1Q58G82 188 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 ZNF789Q5FWF6 425 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 A0A1B0GX78 115 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 GFRA2O00451 464 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 SMPD2O60906 423 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 WNT3P56703 355 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 CCDC190Q86UF4 302 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 LINC00469Q8N7U9 141 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 RPEQ96AT9 228 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 TM4SF18Q96CE8 201 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 OXGR1Q96P68 337 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 TMEM140Q9NV12 185 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 PEAK1Q9H792 1746 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 FAM221AA4D161 298 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 TNFSF11O14788 317 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 CTNSO60931 367 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 ZNF253O75346 499 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 CD3DP04234 171 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 PI3P19957 117 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 LIPAP38571 399 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 IP6K3Q96PC2 410 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 DNAL4O96015 105 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 CLDN15P56746 228 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 ADGRB2O60241 1585 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 MAP1LC3B2A6NCE7 125 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 H3BP45 60 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 TMEFF1Q8IYR6 380 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 WDTC1Q8N5D0 677 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 MAP1LC3BQ9GZQ8 125 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 FAM53CQ9NYF3 392 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 PRSS8Q16651 343 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 ALKBH6Q3KRA9 238 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 ADPRHL1Q8NDY3 354 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 PAM16Q9Y3D7 125 aa12.51□□□□□ -0.41
CSPG4P12-202ENST00000559989 IGKV6D-41A0A0C4DH26 115 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 IFITM5A6NNB3 132 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 DHRS3O75911 302 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 MBPP02686 304 aaPredicted RBP12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 LYPD8Q6UX82 237 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 OR10G8Q8NGN5 311 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 TREX1Q9NSU2 369 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 PSG11Q9UQ72 335 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 KLF13Q9Y2Y9 288 aaPredicted RBP12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 ARFGEF2Q9Y6D5 1785 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 PRKRAO75569 313 aaKnown RBP12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 SLCO2B1O94956 709 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 DPPA3Q6W0C5 159 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 OR52B4Q8NGK2 314 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 TAAR3PQ9P1P4 343 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 PIGAP37287 484 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 SHBQ15464 509 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 CALHM1Q8IU99 346 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 ANKLE1Q8NAG6 615 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 RPS4Y2Q8TD47 263 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 CXorf36Q9H7Y0 433 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 LPAR3Q9UBY5 353 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 ADAM20O43506 726 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 CEACAM6P40199 344 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 CDX1P47902 265 aaPredicted RBP12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 PAFAH1B2P68402 229 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 SAXO2Q658L1 398 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 C6orf15Q6UXA7 325 aaPredicted RBP12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 EMC6Q9BV81 110 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 FAM206AQ9NX38 181 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 POMT2Q9UKY4 750 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 SERTM1A2A2V5 107 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 BSGP35613 385 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 BADQ92934 168 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 SPACA9Q96E40 222 aaPredicted RBP12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 ANKRD10Q9NXR5 420 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 UNCXA6NJT0 531 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 B4GALT3O60512 393 aa12.5□□□□□ -0.41
CSPG4P12-202ENST00000559989 CEBPBP17676 345 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms