RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 OR8S1Q8NH09 359 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 CPNE2Q96FN4 548 aaPredicted RBP15.45■□□□□ 0.06
SNX1-208ENST00000559844 HYLS1Q96M11 299 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 GINS4Q9BRT9 223 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 TMEM59Q9BXS4 323 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 LPAR5Q9H1C0 372 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 BEX1Q9HBH7 125 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 UPB1Q9UBR1 384 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 ING4Q9UNL4 249 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 ZNF835Q9Y2P0 537 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 DOCK7Q96N67 2140 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 SNRPGP15A8MWD9 76 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 MPIG6BO95866 241 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 CD74P04233 296 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 PATE4P0C8F1 98 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 ARF1P84077 181 aaKnown RBP15.45■□□□□ 0.06
SNX1-208ENST00000559844 UBE2V2Q15819 145 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 FJX1Q86VR8 437 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 SPSB1Q96BD6 273 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 ZMAT3Q9HA38 289 aaKnown RBP15.45■□□□□ 0.06
SNX1-208ENST00000559844 PTTG3PQ9NZH4 202 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 TINAGQ9UJW2 476 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 ITGB1BP2Q9UKP3 347 aa15.45■□□□□ 0.06
SNX1-208ENST00000559844 FIGNL2A6NMB9 653 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 AHRRA9YTQ3 701 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 ZNF736B4DX44 427 aaPredicted RBP15.44■□□□□ 0.06
SNX1-208ENST00000559844 IGHV3-9P01782 118 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 GSTP1P09211 210 aaKnown RBP15.44■□□□□ 0.06
SNX1-208ENST00000559844 PTGFRP43088 359 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 HGFACQ04756 655 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 MRPL49Q13405 166 aaKnown RBP15.44■□□□□ 0.06
SNX1-208ENST00000559844 TNK1Q13470 666 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 MEF2DQ14814 521 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 CNN3Q15417 329 aaKnown RBP15.44■□□□□ 0.06
SNX1-208ENST00000559844 C3P1Q6ZMU1 363 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 RNF144BQ7Z419 303 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 TRAPPC6BQ86SZ2 158 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 OR56B1Q8NGI3 324 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 OR4D10Q8NGI6 311 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 OR51S1Q8NGJ8 323 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 FGFBP3Q8TAT2 258 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 TRIB1Q96RU8 372 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 SH3BGRL2Q9UJC5 107 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 MEIKINA0A087WXM9 373 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 WIPF3A6NGB9 483 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 RGS13O14921 159 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 XRCC2O43543 280 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 CREBL2O60519 120 aaPredicted RBP15.44■□□□□ 0.06
SNX1-208ENST00000559844 WDR1O75083 606 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 HPXP02790 462 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 NAT2P11245 290 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 FCGR2AP12318 317 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 RAD52P43351 418 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 IFITM2Q01629 132 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 IGFBP7Q16270 282 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 ACSF3Q4G176 576 aaPredicted RBP15.44■□□□□ 0.06
SNX1-208ENST00000559844 PABPC1L2AQ5JQF8 200 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 NCCRP1Q6ZVX7 275 aaPredicted RBP15.44■□□□□ 0.06
SNX1-208ENST00000559844 DOLPP1Q86YN1 238 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 ZNF100Q8IYN0 542 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 PIAS4Q8N2W9 510 aaPredicted RBP15.44■□□□□ 0.06
SNX1-208ENST00000559844 ZFAND1Q8TCF1 268 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 DVL3Q92997 716 aaPredicted RBP15.44■□□□□ 0.06
SNX1-208ENST00000559844 S100A13Q99584 98 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 RANBP3Q9H6Z4 567 aaPredicted RBP15.44■□□□□ 0.06
SNX1-208ENST00000559844 GP6Q9HCN6 339 aa15.44■□□□□ 0.06
SNX1-208ENST00000559844 NPDC1Q9NQX5 325 aaPredicted RBP15.44■□□□□ 0.06
SNX1-208ENST00000559844 NCOA6Q14686 2063 aaPredicted RBP15.43■□□□□ 0.06
SNX1-208ENST00000559844 PYCARD-AS1I3L0S3 204 aa15.43■□□□□ 0.06
SNX1-208ENST00000559844 CRTAPO75718 401 aaPredicted RBP15.43■□□□□ 0.06
SNX1-208ENST00000559844 PRKACBP22694 351 aa15.43■□□□□ 0.06
SNX1-208ENST00000559844 ZNF626Q68DY1 528 aa15.43■□□□□ 0.06
SNX1-208ENST00000559844 STEAP2Q8NFT2 490 aa15.43■□□□□ 0.06
SNX1-208ENST00000559844 TNFAIP8L1Q8WVP5 186 aa15.43■□□□□ 0.06
SNX1-208ENST00000559844 CMBLQ96DG6 245 aa15.43■□□□□ 0.06
SNX1-208ENST00000559844 SLC25A21Q9BQT8 299 aaPredicted RBP15.43■□□□□ 0.06
SNX1-208ENST00000559844 SELENOIQ9C0D9 397 aa15.43■□□□□ 0.06
SNX1-208ENST00000559844 SCP2D1Q9UJQ7 156 aa15.43■□□□□ 0.06
SNX1-208ENST00000559844 SLC22A20A6NK97 555 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 DISC1C4P0D8 188 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 FABP7O15540 132 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 COX5BP10606 129 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 ANXA7P20073 488 aaKnown RBP15.42■□□□□ 0.06
SNX1-208ENST00000559844 SF3B4Q15427 424 aaKnown RBP eCLIP15.42■□□□□ 0.06
SNX1-208ENST00000559844 PNLIPRP3Q17RR3 467 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 TMEM104Q8NE00 496 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 OR2AE1Q8NHA4 323 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 RAB3CQ96E17 227 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 IFT46Q9NQC8 304 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 ELF5Q9UKW6 265 aaPredicted RBP15.42■□□□□ 0.06
SNX1-208ENST00000559844 OSGIN2Q9Y236 505 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 ZNF175Q9Y473 711 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 TRGV8A0A0C4DH27 118 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 ATP6V1G1O75348 118 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 GNB3P16520 340 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 PTGER4P35408 488 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 CASP6P55212 293 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 GNG2P59768 71 aa15.42■□□□□ 0.06
SNX1-208ENST00000559844 RPS27AP62979 156 aaKnown RBP15.42■□□□□ 0.06
SNX1-208ENST00000559844 ZMYND11Q15326 602 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms