RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ZNF701Q9NV72 531 aaPredicted RBP8.79□□□□□ -1
LRRC28-216ENST00000559819 ASF1BQ9NVP2 202 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 OR5AC2Q9NZP5 309 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 SHPKQ9UHJ6 478 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 FOXD3Q9UJU5 478 aaPredicted RBP8.79□□□□□ -1
LRRC28-216ENST00000559819 MCTS1Q9ULC4 181 aaKnown RBP8.79□□□□□ -1
LRRC28-216ENST00000559819 TNRC18O15417 2968 aaPredicted RBP8.78□□□□□ -1
LRRC28-216ENST00000559819 C9J4A7 227 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 F10P00742 488 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 CNR1P21554 472 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 FPR2P25090 351 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 ACKR3P25106 362 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 FKBP2P26885 142 aaKnown RBP8.78□□□□□ -1
LRRC28-216ENST00000559819 MLF1P58340 268 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 HIST1H3AP68431 136 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 TAGLNQ01995 201 aaKnown RBP8.78□□□□□ -1
LRRC28-216ENST00000559819 ACTBL2Q562R1 376 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 HIST2H3PS2Q5TEC6 136 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 ZNF774Q6NX45 483 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 TFAP2EQ6VUC0 442 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 HIST2H3AQ71DI3 136 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 PEG10Q86TG7 708 aaKnown RBP8.78□□□□□ -1
LRRC28-216ENST00000559819 LHFPL1Q86WI0 220 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 AGBL5Q8NDL9 886 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 OR5AP2Q8NGF4 316 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 OR1S2Q8NGQ3 325 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 M1APQ8TC57 530 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 OR10C1Q96KK4 312 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 CHST5Q9GZS9 411 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 PRO3102Q9H379 93 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 FRYLO94915 3013 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 A0A0U1RQV5 110 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 SPRY1O43609 319 aaPredicted RBP8.78□□□□□ -1
LRRC28-216ENST00000559819 EIF1BO60739 113 aaKnown RBP8.78□□□□□ -1
LRRC28-216ENST00000559819 KNG1P01042 644 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 CHAF1BQ13112 559 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 DRAM2Q6UX65 266 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 Q7L0L9 218 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 GALNTL5Q7Z4T8 443 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 TMEM200AQ86VY9 491 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 MAML2Q8IZL2 1156 aaPredicted RBP8.78□□□□□ -1
LRRC28-216ENST00000559819 OR51F2Q8NH61 342 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 S100A13Q99584 98 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 NMES1Q9C002 83 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 SMOC1Q9H4F8 434 aa8.78□□□□□ -1
LRRC28-216ENST00000559819 CCDC187A0A096LP49 1063 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 FAM230AA0A1W2PPH8 454 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 NTN3O00634 580 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF205O95201 554 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 GP1BAP07359 652 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 HOXB5P09067 269 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 RFPL3SP0C7P2 107 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 NR2C1P13056 603 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 OTX1P32242 354 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF84P51523 738 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF133P52736 654 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-216ENST00000559819 AKR1C2P52895 323 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 B3GALT5-AS1P59052 145 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 DEFA5Q01523 94 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 AKR1C1Q04828 323 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 ZNF273Q14593 569 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 PAN3Q58A45 887 aaKnown RBP8.77□□□□□ -1.01
LRRC28-216ENST00000559819 C20orf196Q8IYI0 205 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 OR2Y1Q8NGV0 311 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 DYRK2Q92630 601 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 HAS2Q92819 552 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 PIK3IP1Q96FE7 263 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 NARS2Q96I59 477 aaKnown RBP8.77□□□□□ -1.01
LRRC28-216ENST00000559819 FAM117AQ9C073 453 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 METTL8Q9H825 291 aaKnown RBP8.77□□□□□ -1.01
LRRC28-216ENST00000559819 PCDHB10Q9UN67 800 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 PCDHGA1Q9Y5H4 931 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 PMS2P1A4D2B8 440 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 DHRS7CA6NNS2 312 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 CEACAM18A8MTB9 384 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 ZNHIT1O43257 154 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 VAMP5O95183 116 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 TMEM225BP0DP42 221 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 B4GALT1P15291 398 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 RPS2P15880 293 aaKnown RBP8.77□□□□□ -1.01
LRRC28-216ENST00000559819 OTX2P32243 289 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 PTGER4P35408 488 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 FOLR3P41439 243 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 CBX5P45973 191 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 RAC1P63000 192 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 Q0VFX4 171 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 CHRFAM7AQ494W8 412 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 AKR7LQ8NHP1 331 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 ALKBH3Q96Q83 286 aaPredicted RBP8.77□□□□□ -1.01
LRRC28-216ENST00000559819 CRLF2Q9HC73 371 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 ACKR4Q9NPB9 350 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 CYTL1Q9NRR1 136 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 GSKIPQ9P0R6 139 aa8.77□□□□□ -1.01
LRRC28-216ENST00000559819 IGKV1-27A0A075B6S5 117 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 TRIM77I1YAP6 450 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 CDK2AP1O14519 115 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 CBR3O75828 277 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 CYC1P08574 325 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 MTCP1P56278 107 aa8.76□□□□□ -1.01
LRRC28-216ENST00000559819 MC2RQ01718 297 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms