RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 ACTG2P63267 376 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 ACTC1P68032 377 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 ACTA1P68133 377 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 ST3GAL3Q11203 375 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 STX3Q13277 289 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 ZNF273Q14593 569 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 KIR2DS1Q14954 304 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 TAF13Q15543 124 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 TIGD6Q17RP2 521 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 CXorf66Q5JRM2 361 aaPredicted RBP7.62□□□□□ -1.19
SMAD3-211ENST00000559460 GPR139Q6DWJ6 353 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 LCN8Q6JVE9 175 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 ZBTB49Q6ZSB9 765 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 THAP5Q7Z6K1 395 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 ZNF561Q8N587 486 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 DRAM1Q8N682 238 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 NOL4LQ96MY1 436 aaPredicted RBP7.62□□□□□ -1.19
SMAD3-211ENST00000559460 SORT1Q99523 831 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 COPS4Q9BT78 406 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 DCLRE1BQ9H816 532 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 YY1AP1Q9H869 796 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 ABCB9Q9NP78 766 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 TBC1D23Q9NUY8 699 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 VAPAQ9P0L0 249 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 BAG5Q9UL15 447 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 MOB4Q9Y3A3 225 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 HSPE1-MOB4S4R3N1 261 aa7.62□□□□□ -1.19
SMAD3-211ENST00000559460 IGKV1D-17A0A075B6S4 117 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 TRIM64CA6NLI5 447 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 C17orf98A8MV24 154 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 RBP4P02753 201 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 IGHV4-30-4P0DP06 118 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 KITP10721 976 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 SPNP16150 400 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 HOXB9P17482 250 aaPredicted RBP7.61□□□□□ -1.19
SMAD3-211ENST00000559460 CFL1P23528 166 aaKnown RBP7.61□□□□□ -1.19
SMAD3-211ENST00000559460 ZNF676Q8N7Q3 588 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 OR6Q1Q8NGQ2 317 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 EME1Q96AY2 570 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 SDSLQ96GA7 329 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 HIST1H2AAQ96QV6 131 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 GON7Q9BXV9 100 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 TXLNGYQ9BZA5 131 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 C20orf27Q9GZN8 174 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 GHITMQ9H3K2 345 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 VSX1Q9NZR4 365 aaPredicted RBP7.61□□□□□ -1.19
SMAD3-211ENST00000559460 HAO1Q9UJM8 370 aa7.61□□□□□ -1.19
SMAD3-211ENST00000559460 H3BSH0 61 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 BIRC5O15392 142 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 RENP00797 406 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 OR8U8P0C7N1 319 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 ZNF728P0DKX0 622 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 SLC2A1P11166 492 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 ZNF823P16415 610 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 MNDAP41218 407 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 RPS6KA3P51812 740 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 PRKXP51817 358 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 IFFO1Q0D2I5 559 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 ZBED5Q49AG3 693 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 LDLRAD2Q5SZI1 272 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 CBLL1Q75N03 491 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 RRM2BQ7LG56 351 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 SLC16A9Q7RTY1 509 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 FAM122BQ7Z309 247 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 SLC35E3Q7Z769 313 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 MSRB3Q8IXL7 192 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 NRMQ8IXM6 262 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 CSNK2A3Q8NEV1 391 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 RNF170Q96K19 258 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 CLEC7AQ9BXN2 247 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 IKZF5Q9H5V7 419 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 SP140LQ9H930 580 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 SRA1Q9HD15 236 aaKnown RBP7.6□□□□□ -1.19
SMAD3-211ENST00000559460 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.6□□□□□ -1.194e-8■□□□□ 10.4
SMAD3-211ENST00000559460 LINC00527Q9UJ94 153 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 MPC1Q9Y5U8 109 aa7.6□□□□□ -1.19
SMAD3-211ENST00000559460 IGHV2-26A0A0B4J1V2 119 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 IMPA2O14732 288 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 NDUFB2O95178 105 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 SERPINA1P01009 418 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 RPLP1P05386 114 aaKnown RBP7.59□□□□□ -1.19
SMAD3-211ENST00000559460 FAM106CPP0CH98 169 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 TNFRSF1BP20333 461 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 CEACAM3P40198 252 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 OR1E2P47887 323 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 CDX1P47902 265 aaPredicted RBP7.59□□□□□ -1.19
SMAD3-211ENST00000559460 EDDM3BP56851 147 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 GABPB1Q06547 395 aaPredicted RBP7.59□□□□□ -1.19
SMAD3-211ENST00000559460 GFOD2Q3B7J2 385 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 SMIM21Q3B7S5 101 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 TIGD4Q8IY51 512 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 FAM156AQ8NDB6 213 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 OR11H1Q8NG94 326 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 ZNF671Q8TAW3 534 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 C4orf3Q8WVX3 66 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 TAMM41Q96BW9 452 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 SPDL1Q96EA4 605 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 REEP6Q96HR9 211 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 ZNF714Q96N38 554 aa7.59□□□□□ -1.19
SMAD3-211ENST00000559460 TSSK2Q96PF2 358 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms