RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ZNF181Q2M3W8 571 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 KRTAP27-1Q3LI81 207 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 KLHL12Q53G59 568 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 METTL11BQ5VVY1 283 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 ZNF770Q6IQ21 691 aaPredicted RBP6.07□□□□□ -1.44
SPG11-213ENST00000558988 LHFPL2Q6ZUX7 228 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 KCTD8Q6ZWB6 473 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 SLC16A9Q7RTY1 509 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 DPY19L4Q7Z388 723 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 FGFRL1Q8N441 504 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 LINC00471Q8N535 108 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 FITM2Q8N6M3 262 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 SCCPDHQ8NBX0 429 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 SGMS2Q8NHU3 365 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 GIPC3Q8TF64 312 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 LRRC29Q8WV35 223 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 LHX4Q969G2 390 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 UPRTQ96BW1 309 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 REEP6Q96HR9 211 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 PGAM5Q96HS1 289 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 NSL1Q96IY1 281 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 NIPSNAP1Q9BPW8 284 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 TTTY10Q9BZA0 68 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 SLC22A4Q9H015 551 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 PPP1R3EQ9H7J1 279 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 SNTG1Q9NSN8 517 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 C14orf119Q9NWQ9 140 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 IL20Q9NYY1 176 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 KIF17Q9P2E2 1029 aa6.07□□□□□ -1.44
SPG11-213ENST00000558988 TRAV38-1A0A0B4J264 116 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 KIR2DS1A0A191URI9 304 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 A0A1B0GW55 424 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 ATP8B1O43520 1251 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 SELENOFO60613 162 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 E2F6O75461 281 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 TFF1P04155 84 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 H2BFMP0C1H6 154 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 DUX4L2P0CJ85 424 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 DUX4L3P0CJ86 424 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 DUX4L4P0CJ87 422 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 DUX4L5P0CJ88 424 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 DUX4L6P0CJ89 424 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 DUX4L7P0CJ90 424 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 MDKP21741 143 aaPredicted RBP6.06□□□□□ -1.44
SPG11-213ENST00000558988 PAICSP22234 425 aaKnown RBP6.06□□□□□ -1.44
SPG11-213ENST00000558988 CFHR2P36980 270 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 MECP2P51608 486 aaKnown RBP6.06□□□□□ -1.44
SPG11-213ENST00000558988 SLC25A1P53007 311 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 ARF6P62330 175 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 GRB2P62993 217 aaKnown RBP6.06□□□□□ -1.44
SPG11-213ENST00000558988 MS4A2Q01362 244 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 PAX2Q02962 417 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 KCNJ8Q15842 424 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 LCN8Q6JVE9 175 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 PLBD1Q6P4A8 553 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 DUX4L9Q6RFH8 374 aaPredicted RBP6.06□□□□□ -1.44
SPG11-213ENST00000558988 FIP1L1Q6UN15 594 aaKnown RBP6.06□□□□□ -1.44
SPG11-213ENST00000558988 BTN2A1Q7KYR7 527 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 PIGWQ7Z7B1 504 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 COMMD2Q86X83 199 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 FAM90A1Q86YD7 464 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.06□□□□□ -1.44
SPG11-213ENST00000558988 FAM216BQ8N7L0 139 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 OR5T2Q8NGG2 359 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 THEM6Q8WUY1 208 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 H1FXQ92522 213 aaKnown RBP6.06□□□□□ -1.44
SPG11-213ENST00000558988 ERGIC1Q969X5 290 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 SEH1LQ96EE3 360 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 CCT8L2Q96SF2 557 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 AMELYQ99218 206 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 DDOQ99489 341 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 FEVQ99581 238 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 CCL13Q99616 98 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 THTPAQ9BU02 230 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 ABHD6Q9BV23 337 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 TRIM15Q9C019 465 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 MAGIXQ9H6Y5 334 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 ZMAT3Q9HA38 289 aaKnown RBP6.06□□□□□ -1.44
SPG11-213ENST00000558988 ONECUT1Q9UBC0 465 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 DUX4Q9UBX2 424 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 BAIAP2Q9UQB8 552 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 DNHD1Q96M86 4753 aa6.06□□□□□ -1.44
SPG11-213ENST00000558988 ANK3Q12955 4377 aaKnown RBP6.06□□□□□ -1.44
SPG11-213ENST00000558988 NBEAL1Q6ZS30 2694 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 ZNF879B4DU55 563 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 PRR23D1E9PI22 279 aaPredicted RBP6.05□□□□□ -1.44
SPG11-213ENST00000558988 PSMD9O00233 223 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 DVL1O14640 695 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 RBMXL2O75526 392 aaKnown RBP6.05□□□□□ -1.44
SPG11-213ENST00000558988 CST1P01037 141 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 MRPL3P09001 348 aaKnown RBP6.05□□□□□ -1.44
SPG11-213ENST00000558988 PRR23D2P0DMB1 279 aaPredicted RBP6.05□□□□□ -1.44
SPG11-213ENST00000558988 SELLP14151 372 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 OTX1P32242 354 aaPredicted RBP6.05□□□□□ -1.44
SPG11-213ENST00000558988 GRK5P34947 590 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 PSMB10P40306 273 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 MAGEA2P43356 314 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 DLX1P56177 255 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 FAM3AP98173 230 aa6.05□□□□□ -1.44
SPG11-213ENST00000558988 SRSF4Q08170 494 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms