RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 ZNF649Q9BS31 505 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 SHARPINQ9H0F6 387 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 MTORP42345 2549 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 TLN2Q9Y4G6 2542 aa13.28□□□□□ -0.28
RABGGTA-206ENST00000558649 E9PI62 339 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 CRLF1O75462 422 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 GBX2P52951 348 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 GNG3P63215 75 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 CHRFAM7AQ494W8 412 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 ESCO2Q56NI9 601 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 FAM120AOSQ5T036 256 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 OR2G6Q5TZ20 316 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 TMEM244Q5VVB8 128 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 LAIR2Q6ISS4 152 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 FDX2Q6P4F2 183 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 LYPD2Q6UXB3 125 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 AHSA2Q719I0 299 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 ITFG2Q969R8 447 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 TMEM80Q96HE8 168 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 JAM3Q9BX67 310 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 BEX2Q9BXY8 128 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 TLNRD1Q9H1K6 362 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 DIMT1Q9UNQ2 313 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 EXOSC1Q9Y3B2 195 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 HIVEP2P31629 2446 aa13.27□□□□□ -0.29
RABGGTA-206ENST00000558649 NSD1Q96L73 2696 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 TRAV20A0A0B4J274 112 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 ANKRD61A6NGH8 418 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 OOEPA6NGQ2 149 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 OR5B21A6NL26 309 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 DHRS7CA6NNS2 312 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 F5H0A9 414 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 H0YJX3 145 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 LGALS8O00214 317 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 PHF1O43189 567 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 AKR7A2O43488 359 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 GYPAP02724 150 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 ZNF20P17024 532 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 HNF1AP20823 631 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 ZFP36P26651 326 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 CCR9P51686 369 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 GTF2A1P52655 376 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 ST3GAL4Q11206 333 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 FAHD2BQ6P2I3 314 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 TMPRSS11AQ6ZMR5 421 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 DCDC5Q6ZRR9 648 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 NLRC3Q7RTR2 1065 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 STX19Q8N4C7 294 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 OR8B3Q8NGG8 313 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 OR5A2Q8NGI9 324 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 OR51A4Q8NGJ6 313 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 OR13C3Q8NGS6 347 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 OR10AC1Q8NH08 325 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 SEH1LQ96EE3 360 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 NEIL1Q96FI4 390 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 FAHD2AQ96GK7 314 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 OR8B2Q96RD0 313 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 CHCHD3Q9NX63 227 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 ERVK-18Q9QC07 812 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 MIOXQ9UGB7 285 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 CLEC2DQ9UHP7 191 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 CDC42EP3Q9UKI2 254 aa13.26□□□□□ -0.29
RABGGTA-206ENST00000558649 TRAV38-1A0A0B4J264 116 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 FAM230AA0A1W2PPH8 454 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 EFCAB10A6NFE3 127 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 OR4C45A6NMZ5 311 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 RHBDL1O75783 438 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 LHBP01229 141 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 WNT2P09544 360 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 ZNF12P17014 697 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 PITPNBP48739 271 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 GNB2P62879 340 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 MRPL28Q13084 256 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 MED21Q13503 144 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 RIPK1Q13546 671 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 KCNJ8Q15842 424 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 DCAF12L2Q5VW00 463 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 TMEM42Q69YG0 159 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 HAGHLQ6PII5 290 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 Q6ZSR3 168 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 KRT74Q7RTS7 529 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 FAM90A1Q86YD7 464 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 CCDC54Q8NEL0 328 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 OR5AK2Q8NH90 309 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 FBLIM1Q8WUP2 373 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 FGGYQ96C11 551 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 ADAT3Q96EY9 351 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 PDCD1LG2Q9BQ51 273 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 SSBP3Q9BWW4 388 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 COMMD4Q9H0A8 199 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 OR51I2Q9H344 312 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 TMEM160Q9NX00 188 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 DNAJB11Q9UBS4 358 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 PSORS1C1Q9UIG5 152 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 HHLA2Q9UM44 414 aa13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 CAB39Q9Y376 341 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 RRP15Q9Y3B9 282 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 FN1P02751 2386 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-206ENST00000558649 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.25□□□□□ -0.291e-6■■■□□ 17.9
RABGGTA-206ENST00000558649 A0A0G2JMP0 313 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms