RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 TMPRSS11AQ6ZMR5 421 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 EGFL6Q8IUX8 553 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 C19orf18Q8NEA5 215 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 CCDC54Q8NEL0 328 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 PATZ1Q9HBE1 687 aaKnown RBP10.37□□□□□ -0.75
SMAD3-205ENST00000558428 TMEM165Q9HC07 324 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 GPR173Q9NS66 373 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 PLCXD1Q9NUJ7 323 aa10.37□□□□□ -0.75
SMAD3-205ENST00000558428 CHCHD3Q9NX63 227 aaKnown RBP10.37□□□□□ -0.75
SMAD3-205ENST00000558428 CNOT2Q9NZN8 540 aaKnown RBP10.37□□□□□ -0.75
SMAD3-205ENST00000558428 CAB39Q9Y376 341 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-205ENST00000558428 RRP15Q9Y3B9 282 aaKnown RBP10.37□□□□□ -0.75
SMAD3-205ENST00000558428 CEACAM18A8MTB9 384 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 ZNF732B4DXR9 585 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 E9PI62 339 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 C3orf80F5H4A9 247 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 CDIPTO14735 213 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 MSMBP08118 114 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 PIPP12273 146 aaPredicted RBP10.36□□□□□ -0.75
SMAD3-205ENST00000558428 CD80P33681 288 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 ZNF404Q494X3 552 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 OR2G6Q5TZ20 316 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 TMEM42Q69YG0 159 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 SFRP4Q6FHJ7 346 aaPredicted RBP10.36□□□□□ -0.75
SMAD3-205ENST00000558428 AHSA2Q719I0 299 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 C11orf53Q8IXP5 236 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 STX19Q8N4C7 294 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 GCSAMQ8N6F7 178 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 ZNF676Q8N7Q3 588 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 DEFB108BQ8NET1 73 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 OR5A2Q8NGI9 324 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 OR51F2Q8NH61 342 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 HAVCR2Q8TDQ0 301 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 LRRC29Q8WV35 223 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 RPL3LQ92901 407 aaKnown RBP10.36□□□□□ -0.75
SMAD3-205ENST00000558428 TMEM246Q9BRR3 403 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 TLNRD1Q9H1K6 362 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 METTL17Q9H7H0 456 aaPredicted RBP10.36□□□□□ -0.75
SMAD3-205ENST00000558428 PSORS1C1Q9UIG5 152 aa10.36□□□□□ -0.75
SMAD3-205ENST00000558428 NAV3Q8IVL0 2385 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 ANKRD61A6NGH8 418 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 OR5B21A6NL26 309 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 OR4C45A6NMZ5 311 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 LGALS8O00214 317 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 FSTL3O95633 263 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 ISG15P05161 165 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 CCDC159P0C7I6 412 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 RPS2P15880 293 aaKnown RBP10.35□□□□□ -0.75
SMAD3-205ENST00000558428 EGR1P18146 543 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 MYF6P23409 242 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 VHLP40337 213 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 TGM4P49221 684 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 GTF2A1P52655 376 aaPredicted RBP10.35□□□□□ -0.75
SMAD3-205ENST00000558428 DVL1P1P54792 670 aaPredicted RBP10.35□□□□□ -0.75
SMAD3-205ENST00000558428 FAM76BQ5HYJ3 339 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 C6orf141Q5SZD1 244 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 WDR82Q6UXN9 313 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 GLCCI1Q86VQ1 547 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 SCCPDHQ8NBX0 429 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 C10orf35Q96D05 121 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 ANKRD60Q9BZ19 345 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 COMMD4Q9H0A8 199 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 ERVK-18Q9QC07 812 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 MIOXQ9UGB7 285 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 CLEC2DQ9UHP7 191 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 HHLA2Q9UM44 414 aa10.35□□□□□ -0.75
SMAD3-205ENST00000558428 TRAV38-1A0A0B4J264 116 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 TRBV2A0A0J9YWF9 115 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 OOEPA6NGQ2 149 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 TMEM212A6NML5 194 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 F5H0A9 414 aaPredicted RBP10.34□□□□□ -0.75
SMAD3-205ENST00000558428 SLC1A7O00341 560 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 PLPP2O43688 288 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 GATBO75879 557 aaKnown RBP10.34□□□□□ -0.75
SMAD3-205ENST00000558428 SERPINA3P01011 423 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 LHBP01229 141 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 ZNF20P17024 532 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 CFHR2P36980 270 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 GMFBP60983 142 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 SEC61A1P61619 476 aaKnown RBP10.34□□□□□ -0.75
SMAD3-205ENST00000558428 LCN2P80188 198 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 KCNJ8Q15842 424 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 ESCO2Q56NI9 601 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 DCDC5Q6ZRR9 648 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 OR51A4Q8NGJ6 313 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 OR13C3Q8NGS6 347 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 OR10Z1Q8NGY1 313 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 OR10AC1Q8NH08 325 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 OR52N1Q8NH53 320 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 OR5AK2Q8NH90 309 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 TRMT10AQ8TBZ6 339 aaKnown RBP10.34□□□□□ -0.75
SMAD3-205ENST00000558428 NPRL2Q8WTW4 380 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 GATAD2BQ8WXI9 593 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 TMEM186Q96B77 213 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 ADAT3Q96EY9 351 aaPredicted RBP10.34□□□□□ -0.75
SMAD3-205ENST00000558428 PDCD1LG2Q9BQ51 273 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 CHST5Q9GZS9 411 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 OR51I2Q9H344 312 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 TRIM36Q9NQ86 728 aa10.34□□□□□ -0.75
SMAD3-205ENST00000558428 HIF1ANQ9NWT6 349 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms