RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 SLC25A10Q9UBX3 287 aaPredicted RBP12.78□□□□□ -0.36
TPM1-211ENST00000558314 MEIOCA2RUB1 952 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 TMEM210A6NLX4 147 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 ZNF732B4DXR9 585 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 M0QZ24 198 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 NPFFO15130 113 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 RHBDL1O75783 438 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 FBP1P09467 338 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 T-ENOLP0DO92 83 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 AMY2BP19961 511 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 KRTAP10-3P60369 221 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 PSMA6P60900 246 aaKnown RBP12.77□□□□□ -0.37
TPM1-211ENST00000558314 SNAPC1Q16533 368 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 DGUOKQ16854 277 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 DHRS7BQ6IAN0 325 aaPredicted RBP12.77□□□□□ -0.37
TPM1-211ENST00000558314 MOB3CQ70IA8 216 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 FAM185AQ8N0U4 392 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 LY6G5BQ8NDX9 201 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 FGF23Q9GZV9 251 aaPredicted RBP12.77□□□□□ -0.37
TPM1-211ENST00000558314 TLNRD1Q9H1K6 362 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 TCF7L1Q9HCS4 588 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 ABCB9Q9NP78 766 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 NLKQ9UBE8 527 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 TRRAPQ9Y4A5 3859 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 PKD1L1Q8TDX9 2849 aa12.77□□□□□ -0.37
TPM1-211ENST00000558314 ZNF816-ZNF321PA0A0X1KG74 233 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 RNASEK-C17orf49H0YIS7 233 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 GSC2O15499 205 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 PRODHO43272 600 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 CST4P01036 141 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 TGM4P49221 684 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 CBX1P83916 185 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 GUCA2AQ02747 115 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 GK3PQ14409 553 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 TAF9Q16594 264 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 PLCXD3Q63HM9 321 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 GDPGP1Q6ZNW5 385 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 LDLRAD3Q86YD5 345 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 BATF2Q8N1L9 274 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 OR10Z1Q8NGY1 313 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 LINC01006Q8NI28 216 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 HPSE2Q8WWQ2 592 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 LRTOMTQ8WZ04 291 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 MED30Q96HR3 178 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 IKZF2Q9UKS7 526 aa12.76□□□□□ -0.37
TPM1-211ENST00000558314 TMEM269A0A1B0GVZ9 245 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 ARRDC5A6NEK1 342 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 ANKRD61A6NGH8 418 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 OR2AT4A6NND4 320 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 H0YAE9 185 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 TIMM23O14925 209 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 FAM107AO95990 144 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 MAP2K3P46734 347 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 ESRRGP62508 458 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 BLMHQ13867 455 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 FLOT2Q14254 428 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 C11orf91Q3C1V1 193 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 PDLIM3Q53GG5 364 aaPredicted RBP12.75□□□□□ -0.37
TPM1-211ENST00000558314 SLC35D3Q5M8T2 416 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 KCTD18Q6PI47 426 aaPredicted RBP12.75□□□□□ -0.37
TPM1-211ENST00000558314 ZNF788Q6ZQV5 615 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 Q6ZSV7 163 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 RHOUQ7L0Q8 258 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 Q8N7P7 452 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 ZNRF1Q8ND25 227 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 PAPD5Q8NDF8 572 aaKnown RBP12.75□□□□□ -0.37
TPM1-211ENST00000558314 OR51E1Q8TCB6 317 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 DUS3LQ96G46 650 aaKnown RBP12.75□□□□□ -0.37
TPM1-211ENST00000558314 CITED1Q99966 193 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 YY1AP1Q9H869 796 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 ZNRD1Q9P1U0 126 aa12.75□□□□□ -0.37
TPM1-211ENST00000558314 AQP12BA6NM10 295 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 GPR37O15354 613 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 SIGLEC5O15389 551 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 ANGPTL7O43827 346 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 FKBP6O75344 327 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 ANXA8P13928 327 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 FAHP16930 419 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 ALOX5APP20292 161 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 SAA4P35542 130 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 GNG3P63215 75 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 CDK5Q00535 292 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 LY6EQ16553 131 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 ATPAF1Q5TC12 328 aaPredicted RBP12.74□□□□□ -0.37
TPM1-211ENST00000558314 LCN1P1Q5VSP4 162 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 HAGHLQ6PII5 290 aaPredicted RBP12.74□□□□□ -0.37
TPM1-211ENST00000558314 AQP12AQ8IXF9 295 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 ANGPTL6Q8NI99 470 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 PPP1R14AQ96A00 147 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 ZNF488Q96MN9 340 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 MROQ9BYG7 248 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 PBOV1Q9GZY1 135 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 PPA2Q9H2U2 334 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 GPR84Q9NQS5 396 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 VPREB3Q9UKI3 123 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 PIGLQ9Y2B2 252 aa12.74□□□□□ -0.37
TPM1-211ENST00000558314 M0R129 80 aa12.73□□□□□ -0.37
TPM1-211ENST00000558314 GYG2O15488 501 aa12.73□□□□□ -0.37
TPM1-211ENST00000558314 ACAA1P09110 424 aaPredicted RBP12.73□□□□□ -0.37
TPM1-211ENST00000558314 SLC2A5P22732 501 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms