RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 IGLV3-19P01714 112 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 HPNP05981 417 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 SNRNP70P08621 437 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF14P17017 642 aaPredicted RBP10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 CDAP32320 146 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 CSNK1EP49674 416 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 ACY1Q03154 408 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 HYAL1Q12794 435 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 EIF3IQ13347 325 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 AWAT1Q58HT5 328 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 RTL6Q6ICC9 239 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 C16orf47Q6ZP98 133 aaPredicted RBP10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 FAM57BQ71RH2 274 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 NAA11Q9BSU3 229 aaPredicted RBP10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 RAB33BQ9H082 229 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 DUSP15Q9H1R2 295 aaPredicted RBP10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 AMDHD2Q9Y303 409 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 LSM5Q9Y4Y9 91 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 ADAMTS9Q9P2N4 1935 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 EXPH5Q8NEV8 1989 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 IGKV1-9A0A0C4DH69 117 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 C7orf77A4D0Y5 90 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 PGA4P0DJD7 388 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 PGA3P0DJD8 388 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 PRF1P14222 555 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 SNCAP37840 140 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 GLP1RP43220 463 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 PPA1Q15181 289 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 KISS1Q15726 138 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 C1orf189Q5VU69 101 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 OR5D18Q8NGL1 313 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 OR14K1Q8NGZ2 314 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 TAAR9Q96RI9 348 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF701Q9NV72 531 aaPredicted RBP10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 METTL1Q9UBP6 276 aaKnown RBP10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 CD207Q9UJ71 328 aa10.4□□□□□ -0.74
VIPAS39-211ENST00000557658 SHISA8B8ZZ34 492 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 M0R036 132 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 RER1O15258 196 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 CA11O75493 328 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 CTSDP07339 412 aaPredicted RBP10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 FOSL2P15408 326 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 NME1P15531 152 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 THBS4P35443 961 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 PMELP40967 661 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 ALDH3B1P43353 468 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 MYBPHQ13203 477 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 GUK1Q16774 197 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 MIDNQ504T8 468 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 GGNBP1Q5YKI7 109 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 SEMA6DQ8NFY4 1073 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 S100A13Q99584 98 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 ZNF2Q9BSG1 426 aaPredicted RBP10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 SEBOXQ9HB31 216 aaPredicted RBP10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 NIT2Q9NQR4 276 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 GSN-AS1Q9NRJ2 163 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 SDHAF3Q9NRP4 125 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 BORCS7-ASMTA0A0B4J1R7 106 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 RHPN2P1A8MT19 583 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 NAT2P11245 290 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 SERPINA2P20848 420 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 ZNF41P51814 821 aaPredicted RBP10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 GRB2P62993 217 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 FABP9Q0Z7S8 132 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 MFAP5Q13361 173 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 KRBOX4Q5JUW0 171 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 CARD17Q5XLA6 110 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 SLC25A47Q6Q0C1 308 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 C1QL2Q7Z5L3 287 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 C7orf61Q8IZ16 206 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 SHDQ96IW2 340 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 PARP12Q9H0J9 701 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 ARV1Q9H2C2 271 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 SPACA1Q9HBV2 294 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 PNRC2Q9NPJ4 139 aaKnown RBP10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 LUZP4Q9P127 313 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 REV3LO60673 3130 aa10.39□□□□□ -0.75
VIPAS39-211ENST00000557658 RALGAPA1Q6GYQ0 2036 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 USP34Q70CQ2 3546 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 IGHV3-20A0A0C4DH32 117 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 CRYM-AS1A6NIL9 109 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 A6NLC8 198 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 E5RGE8 158 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 STMND1H3BQB6 276 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 RRP8O43159 456 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 NME2P1O60361 137 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 SCGB1D2O95969 90 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 SEC11BP0C7V7 166 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 ZNF616Q08AN1 781 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 LCN10Q6JVE6 187 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 C17orf82Q86X59 251 aaPredicted RBP10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 ADPRHL1Q8NDY3 354 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 PLPP5Q8NEB5 264 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 NPRL2Q8WTW4 380 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 SLC25A43Q8WUT9 341 aaPredicted RBP10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 MRPL24Q96A35 216 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 PGAM5Q96HS1 289 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 TM2D1Q9BX74 207 aa10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 EIF5A2Q9GZV4 153 aaKnown RBP10.38□□□□□ -0.75
VIPAS39-211ENST00000557658 NSG2Q9Y328 171 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms